PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEA1485
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Subtree rooted at node 121: /--------------- Niben101Scf14929g00007.1 [Nicotiana benthamiana] (5) | | /----- XP_016432826.1 [Nicotiana tabacum] (37) /--69-+ /-100+ | | | \----- XP_009766292.1 [Nicotiana sylvestris] (65) | \-100+ | | /----- XP_009600091.1 [Nicotiana tomentosiformis] (38) /----99---+ \-100+ | | \----- XP_016471592.1 [Nicotiana tabacum] (71) | | | \--------------------- Niben101Scf00996g04023.1 [Nicotiana benthamiana] (48) | | /--------------------- CA09g08120 [Capsicum annuum] (12) /-75-+ | | | | /----- Sopim12g011200.0.1 [Solanum pimpinellifolium] (15) | | | /-100+ | | /-84-+ | \----- Solyc12g011200.1.1 [Solanum lycopersicum] (47) | | | | /-100+ | | | | | \---------- Sopen12g006560.1 [Solanum pennellii] (50) /-72-+ \-100+ \-100-+ | | | \--------------- PGSC0003DMP400013709 [Solanum tuberosum] (67) | | | | | \-------------------------- Sme2.5_01461.1_g00006.1 [Solanum melongena] (46) | | | | /----- Peaxi162Scf00807g00004.1 [Petunia axillaris] (32) | \--------------94--------------+ | \----- Peinf101Scf01109g09006.1 [Petunia inflata] (59) | | /--------------- PGSC0003DMP400030318 [Solanum tuberosum] (14) /-70-+ | | | /-100-+ /---------- Sopen07g029640.1 [Solanum pennellii] (18) | | | | | | | | \-99-+ /----- Sopim07g056280.0.1 [Solanum pimpinellifolium] (30) | | /-100+ \-99-+ | | | | \----- Solyc07g056280.2.1 [Solanum lycopersicum] (44) | | | | | | | \--------------------- CA07g15490 [Capsicum annuum] (45) | | | | | | /----- Peinf101Scf00665g17027.1 [Petunia inflata] (23) | \------99------+ /------100------+ | | | \----- Peaxi162Scf00111g00122.1 [Petunia axillaris] (26) | | | /--65-+ | | /---------- Niben101Scf23239g00002.1 [Nicotiana benthamiana] (27) | | | | | | | \-80-+ /-99-+ /----- XP_016468091.1 [Nicotiana tabacum] (54) | | | | \-100+ | | | | \----- XP_009615724.1 [Nicotiana tomentosiformis] (58) | | | | | | \-100-+ /----- XP_009776873.1 [Nicotiana sylvestris] (35) | | |---100---+ | | | \----- XP_016455219.1 [Nicotiana tabacum] (43) | | | | | \--------------- Niben101Scf01507g00004.1 [Nicotiana benthamiana] (60) | | | | /----- Itr_sc000114.1_g00042.1 [Ipomoea trifida] (29) | \-------------------91-------------------+ | \----- Itr_sc000297.1_g00008.1 [Ipomoea trifida] (69) | | /----- Ote100247360041 [Ocimum tenuiflorum] (9) /-58-+ /-100+ | | | \----- Ote100150970181 [Ocimum tenuiflorum] (22) | | /-100+ | | | \---------- SMil_00001566-RA_Salv [Salvia miltiorrhiza] (25) | | /-100-+ | | | \--------------- XP_011098088.1 [Sesamum indicum] (56) | | /-98-+ | | | \--------------------- Migut.M00487.1.p [Mimulus guttatus] (42) | | | | |------------95-----------+ /----- Ote100207310041 [Ocimum tenuiflorum] (28) /-66-+ | | /-97-+ | | | | | \----- XP_011082906.1 [Sesamum indicum] (68) | | | \-------93------+ | | | \---------- SMil_00022052-RA_Salv [Salvia miltiorrhiza] (31) | | | | | | /----- Cc05_g09630 [Coffea canephora] (20) --52-+ | \----------------------80----------------------+ | | \----- cra_locus_2950_iso_1 [Catharanthus roseus] (40) | | | \--------------------------------------------------------- Achn132991 [Actinidia chinensis] (6) | \-------------------------------------------------------------- DCAR_032121 [Daucus carota] (21) Root part of tree: /------------------------------------------------------------------- Sopim02g071130.0.1 [Solanum pimpinellifolium] (1) | |------------------------------------------------------------------- Solyc02g071130.2.1 [Solanum lycopersicum] (8) | | /------ XP_016490925.1 [Nicotiana tabacum] (2) | /-100-+ | | \------ XP_009760855.1 [Nicotiana sylvestris] (64) | /-100-+ | | | /------ Niben101Scf04881g01002.1 [Nicotiana benthamiana] (73) | | \-100-+ | /--------100-------+ \------ Niben101Scf01785g07001.1 [Nicotiana benthamiana] (74) | | | | | | /------ XP_009616483.1 [Nicotiana tomentosiformis] (16) | | \----100----+ | | \------ XP_016459945.1 [Nicotiana tabacum] (66) | | | | /------------------------ EPS57629.1 [Genlisea aurea] (3) | | | | | | /------ Ote100222560021 [Ocimum tenuiflorum] (4) | | | /--99-+ | | | | \------ Ote100165010051 [Ocimum tenuiflorum] (49) | | | /-100-+ | | | | \------------ SMil_00012644-RA_Salv [Salvia miltiorrhiza] (36) | | |--88-+ | | | | /------ Migut.M00946.1.p [Mimulus guttatus] (34) | | | \-----88----+ | | | \------ XP_011096511.1 [Sesamum indicum] (39) | | | | | | /------------ (121) | /-100-+ | | | | | |-----55----+ /------ DCAR_005083 [Daucus carota] (13) | | | | \--60-+ | | | | \------ Achn230981 [Actinidia chinensis] (55) + | | | | | | | /------ Migut.H01387.1.p [Mimulus guttatus] (7) | | | | | | | | /-100-+--------76-------+------ XP_011085274.1 [Sesamum indicum] (17) | | | | | | | | | | | \------ KZV51057.1 [Dorcoceras hygrometricum] (19) | | | | | | | | | | /------ cra_locus_28262_iso_1 [Catharanthus roseus] (10) | | | | | /--97-+ | | | | | | \------ Cc09_g09190 [Coffea canephora] (75) | | | | |-----59----+ | | | | | | /------ Itr_sc001370.1_g00002.1 [Ipomoea trifida] (33) | | | | | \-100-+ | /-100-+ | | | \------ Itr_sc001446.1_g00003.1 [Ipomoea trifida] (41) | | | | | | | | | \--100-+ | /------ 678364323 [Utricularia gibba] (11) | | | | |--------71-------+ | | | | | \------ 678420838 [Utricularia gibba] (24) | | | | | | | | | |------------------------ KZV56028.1 [Dorcoceras hygrometricum] (53) | | | | | | | | | | /------ SMil_00005188-RA_Salv [Salvia miltiorrhiza] (57) | /-100-+ | | \--------64-------+ | | | | | \------ Ote100032390011 [Ocimum tenuiflorum] (62) | | | | | | | | | | /------ Peaxi162Scf01189g00009.1 [Petunia axillaris] (51) | | | | \----------100----------+ | | | | \------ Peinf101Scf00040g09006.1 [Petunia inflata] (72) | /-100-+ | | | | | | \------------------------------------------- CA02g12180 [Capsicum annuum] (61) | | | | | | | \------------------------------------------------- Sme2.5_03980.1_g00003.1 [Solanum melongena] (63) \-100-+ | | \------------------------------------------------------- PGSC0003DMP400017131 [Solanum tuberosum] (70) | \------------------------------------------------------------- Sopen02g020200.1 [Solanum pennellii] (52) |