PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KZV56028.1
Organism
Dorcoceras hygrometricum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Gesneriaceae; Didymocarpoideae; Trichosporeae; Loxocarpinae; Dorcoceras
Family WRKY
Protein Properties Length: 382aa    MW: 42565 Da    PI: 7.2145
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KZV56028.1genomeCNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.92.1e-33169226259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK vk+s++prsYYrCt+++Cpvkk+vers +dp+vv++tYeg+Hnh+
  KZV56028.1 169 EDGYRWRKYGQKAVKSSPYPRSYYRCTTQKCPVKKRVERSYQDPSVVITTYEGQHNHH 226
                 8********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.7E-35153228IPR003657WRKY domain
SuperFamilySSF1182902.75E-29160228IPR003657WRKY domain
PROSITE profilePS5081132.455163228IPR003657WRKY domain
SMARTSM007742.1E-38168227IPR003657WRKY domain
PfamPF031065.2E-26169226IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MSENFNDFYY HHPFQDHIDH GRNSTGAGNS SAHMQNSSAQ NLQVIDQSNS YLGFTGFLHG  60
GFDQSVPGSF GSSSEAFYAV KEEHKPAVDG GENPTTPNSS ISSSSTEAAA GEEDVSKIKK  120
SEGKKTSVED HGEDSSSKKD GSKCKKKGEK KQREPRFAFM TKSEVDHLED GYRWRKYGQK  180
AVKSSPYPRS YYRCTTQKCP VKKRVERSYQ DPSVVITTYE GQHNHHLPTS LRGNVAGIFP  240
PSMITPPLAM DGPPANFPDQ EMFVHQMNPH NIYGYGGGGA SGVYHQQTSF ARDNQQQYQG  300
LKGPKCSKEI ENLEGWINHF FNSEERQQFV LAHLLLGKAA LRHSDDSSDD LNSPLPLMSS  360
WRKIHPQISH IVGPQFIEFT LA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-28158228777Probable WRKY transcription factor 4
2lex_A1e-28158228777Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapKZV56028.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011085274.18e-98probable WRKY transcription factor 71
TrEMBLA0A2Z7D8L70.0A0A2Z7D8L7_9LAMI; Putative WRKY transcription factor 71
STRINGXP_009616483.11e-76(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14852475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.11e-48WRKY DNA-binding protein 28