PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf01189g00009.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

WRKY

Protein Properties

Length: 334aa MW: 37497.4 Da PI: 7.3169

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf01189g00009.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107.7	5.9e-34	188	245	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCts++C+vkk+vers +dp++v++tYeg+Hnh+ Peaxi162Scf01189g00009.1 188 EDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCQVKKRVERSFQDPSIVITTYEGQHNHH 245 8********************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	3.0E-35	174	247	IPR003657	WRKY domain
SuperFamily	SSF118290	1.15E-29	179	247	IPR003657	WRKY domain
PROSITE profile	PS50811	32.374	182	247	IPR003657	WRKY domain
SMART	SM00774	7.6E-40	187	246	IPR003657	WRKY domain
Pfam	PF03106	2.8E-26	188	245	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence Send to blast
MADELRNFYY HQPFQEDRHS FLYSQQRASS TSEDDSSVVQ NLHMLDPSFM SYGEYIHGSS 60 CDYSTSLGKP FGFSAPSPSS EAFSNSIKDH DDIKPAAVLH VDAHNNDSIG RGSETPVTPN 120 SSISSSSTEA AADDQDSNKT STKKDKQVKD NLEDGEDASK NKAKKKGEKK QKPPKFAFMT 180 KSEVDHLEDG YRWRKYGQKA VKNSPYPRSY YRCTSQKCQV KKRVERSFQD PSIVITTYEG 240 QHNHHLPATL RGNVARMLSP SMLLTPSPSN FHHQELIMPP SVYGHGGSSA FGNPQSSMSM 300 YHQNLTPHHQ QLQLPPDYGL LQDMVPSMFP KQEP

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1wj2_A	6e-30	177	248	7	78	Probable WRKY transcription factor 4
2lex_A	6e-30	177	248	7	78	Probable WRKY transcription factor 4
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009616483.1	1e-150	PREDICTED: probable WRKY transcription factor 71
Refseq	XP_016459945.1	1e-150	PREDICTED: probable WRKY transcription factor 71
TrEMBL	A0A1S3Z648	1e-148	A0A1S3Z648_TOBAC; probable WRKY transcription factor 71
STRING	XP_009616483.1	1e-149	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1485	24	75

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29860.1	1e-55	WRKY DNA-binding protein 71