PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1981
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 148: /----- Cotton_A_01262_BGI-A2_v1.0 [Gossypium arboreum] (2) /----97---+ | \----- Cotton_A_17716_BGI-A2_v1.0 [Gossypium arboreum] (4) | /--97-+ /----- Gh_A05G0407 [Gossypium hirsutum] (23) | | /-85-+ | | | \----- Cotton_A_01261_BGI-A2_v1.0 [Gossypium arboreum] (34) | \-94-+ | | /----- Gh_D05G0524 [Gossypium hirsutum] (54) | \-100+ | \----- Gorai.009G054200.1 [Gossypium raimondii] (79) | /-100+ /----- Gorai.004G291100.1 [Gossypium raimondii] (9) | | /-100+ | | | \----- Gh_D08G2618 [Gossypium hirsutum] (76) | | /-100+ | | | | /----- Cotton_A_11915_BGI-A2_v1.0 [Gossypium arboreum] (37) | | | \-100+ | | | \----- Gh_A08G2252 [Gossypium hirsutum] (39) | \--63-+ /-100+ | /----- Gh_A07G0197 [Gossypium hirsutum] (21) | | | /-94-+ | | | | \----- Cotton_A_07235_BGI-A2_v1.0 [Gossypium arboreum] (56) | | \-100+ | | | /----- Gorai.001G030600.1 [Gossypium raimondii] (32) | | \-100+ | | \----- Gh_D07G0251 [Gossypium hirsutum] (52) | | | \-------------------------- Thecc1EG037098t1 [Theobroma cacao] (55) | /-100+ /----- Ciclev10007648m [Citrus clementina] (6) | | /-100+ | | | \----- orange1.1g005719m [Citrus sinensis] (36) | | /-100+ | | | | /----- Ciclev10033605m [Citrus clementina] (67) | | | \-100+ | | /-100-+ \----- orange1.1g009670m [Citrus sinensis] (75) | | | | /-100+ | | | /----- Neem_504_f_6 [Azadirachta indica] (25) | | \---100---+ \---100---+ | | | \----- Neem_21128_f_1 [Azadirachta indica] (26) | | | | | \--------------------- evm.model.supercontig_46.117 [Carica papaya] (48) | | | | /----- Eucgr.C00380.1.p [Eucalyptus grandis] (11) | \--------------100-------------+ | \----- EcC023480.80 [Eucalyptus camaldulensis] (20) | | /----- Gh_D13G1951 [Gossypium hirsutum] (5) | /-100+ | | \----- Gorai.010G243900.1 [Gossypium raimondii] (24) | /----100---+ | | | /----- Cotton_A_09096_BGI-A2_v1.0 [Gossypium arboreum] (10) /-100+ | \-100+ | | | \----- Gh_A13G1590 [Gossypium hirsutum] (43) | | | | | | /----- Cotton_A_01185_BGI-A2_v1.0 [Gossypium arboreum] (15) | | /-100+ /-100+ | | | | | \----- Gh_A05G0473 [Gossypium hirsutum] (30) | | | | /-100+ | | | | | | /----- Gorai.009G061000.1 [Gossypium raimondii] (41) | | | | | \-89-+ | | | \--93-+ \----- Gh_D05G0587 [Gossypium hirsutum] (64) | | /-73-+ | /-100-+ | | | \--------------- Thecc1EG036926t1 [Theobroma cacao] (53) | | | | | | | | | | /----- Ciclev10007639m [Citrus clementina] (19) | | | | | /-100+ | | \----91---+ | | \----- orange1.1g005465m [Citrus sinensis] (28) | | | \------100------+ | | | \---------- Neem_6585_f_3 [Azadirachta indica] (46) | | | | | \------------------------------- evm.model.supercontig_127.10 [Carica papaya] (17) | | | \---------------------------------------------- XP_010525933.1 [Tarenaya hassleriana] (40) | | /----- Csa16g046790.1 [Camelina sativa] (12) | /-99-+ | | \----- Csa09g090370.1 [Camelina sativa] (18) | /-100+ | | \---------- Csa07g055200.1 [Camelina sativa] (68) | /--94-+ | | | /----- Carubv10022837m [Capsella rubella] (47) | | \---100---+ | /-100+ \----- Cagra.2381s0022.1.p [Capsella grandiflora] (72) /-100+ | | | | /-53-+ \--------------------- Bostr.26326s0153.1.p [Boechera stricta] (29) | | | | | | | \-------------------------- AT2G25180.1 [Arabidopsis thaliana] (74) | | /-100+ | | | | /----- 481375 [Arabidopsis lyrata] (62) | | | \-----------100-----------+ | | | \----- Araha.0387s0003.1.p [Arabidopsis halleri] (71) | | | | | | /----- 676791942 [Sisymbrium irio] (13) | | | /-------93------+ | | | | \----- Tp4g04160 [Thellungiella parvula] (60) | | /-100+ | | | | | | /----- XP_013631146.1 [Brassica oleracea] (22) | | | | | /-100+ /-100+ | | | /-100+ | \----- GSBRNA2T00096513001 [Brassica napus] (57) | | | | | | | /-100+ | | | | | | | | | /----- XP_009140627.1 [Brassica rapa] (44) | | | | | | | | \-100+ | | | | | | \-100-+ \----- GSBRNA2T00058348001 [Brassica napus] (73) | | \----100---+ \----65---+ | | | | | | /----- RrC9448_p1 [Raphanus raphanistrum] (51) | | | | \---100---+ | | | | \----- Rsa1.0_02367.1_g00004.1 [Raphanus sativus] (77) | | | | | | | \-------------------------- Thhalv10000098m [Eutrema salsugineum] (33) | | | | | \----------------------------------------- AA249G00001 [Aethionema arabicum] (35) | | | \--------------------------------------------------------- KFK35034.1 [Arabis alpina] (14) | | /----- GSBRNA2T00077765001 [Brassica napus] (3) | /-100+ --100+ | \----- XP_009138054.1 [Brassica rapa] (49) | /-100+ | | | /----- XP_013599414.1 [Brassica oleracea] (8) | | \-100+ | /-100-+ \----- GSBRNA2T00099828001 [Brassica napus] (69) | | | | | | /----- Rsa1.0_00092.1_g00036.1 [Raphanus sativus] (45) | | \---100---+ | | \----- RrC3240_p3 [Raphanus raphanistrum] (66) | /-100+ | | | /----- XP_013621510.1 [Brassica oleracea] (16) | | | /-100+ | | | | \----- GSBRNA2T00130521001 [Brassica napus] (27) | /-100+ \----100---+ | | | \---------- RrC19440_p1 [Raphanus raphanistrum] (70) | | | | /-98-+ \-------------------------- Tp7g29740 [Thellungiella parvula] (59) | | | \-----------100-----------+ \------------------------------- 676740606 [Sisymbrium irio] (65) | \------------------------------------ Thhalv10024866m [Eutrema salsugineum] (63) Root part of tree: /------------------------------------------------------------------- AT4G31920.1 [Arabidopsis thaliana] (1) | | /----------- 857408 [Arabidopsis lyrata] (7) |--------------------------100--------------------------+ | \----------- Araha.3172s0002.1.p [Arabidopsis halleri] (78) | + /-------------------------------------------------------- (148) | | | | /----------- Cagra.3807s0064.1.p [Capsella grandiflora] (31) | | /---------100---------+ | | | \----------- Carubv10004554m [Capsella rubella] (38) \----97----+ | | /----100----+ /----------- Csa10g010570.1 [Camelina sativa] (42) | | | /----100---+ | | | | \----------- Csa12g014090.1 [Camelina sativa] (61) \----100---+ \----100---+ | \---------------------- Csa11g011390.1 [Camelina sativa] (58) | \--------------------------------------------- Bostr.7867s1047.1.p [Boechera stricta] (50) |