PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1780
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 139: /----- Thhalv10020717m [Eutrema salsugineum] (3) /----------------------100---------------------+ | \----- Thhalv10020745m [Eutrema salsugineum] (22) | | /----- GSBRNA2T00072913001 [Brassica napus] (4) | /-100+ | | \----- GSBRNA2T00004863001 [Brassica napus] (53) | /-100+ | | \---------- XP_009122861.1 [Brassica rapa] (44) | /-100-+ | | \--------------- XP_013590798.1 [Brassica oleracea] (27) | /-100+ | | | /----- RrC6409_p2 [Raphanus raphanistrum] (19) | | \------100------+ | | \----- Rsa1.0_00951.1_g00018.1 [Raphanus sativus] (34) | | | | /----- GSBRNA2T00072911001 [Brassica napus] (5) | /-100+ | | | | /-100+----- GSBRNA2T00072912001 [Brassica napus] (39) | | | | | | | | /-100+ \----- XP_009122872.1 [Brassica rapa] (51) | | | | | | | | | \---------- XP_013591746.1 [Brassica oleracea] (37) | /-66-+ \----100---+ | | | | /----- Rsa1.0_00951.1_g00019.1 [Raphanus sativus] (56) | | | \---100---+ | | | \----- RrC6409_p3 [Raphanus raphanistrum] (78) | | | | | \------------------------------- 676764946 [Sisymbrium irio] (74) | | /-78-+ | /----- Rsa1.0_01363.1_g00003.1 [Raphanus sativus] (10) | | | /---100---+ | | /-76-+ | \----- RrC1756_p2 [Raphanus raphanistrum] (69) | | | | | | | | | /-100-+ /----- XP_013623093.1 [Brassica oleracea] (40) | | | | | | /-100+ | | | | | | | \----- GSBRNA2T00110506001 [Brassica napus] (59) | | | | | \-100+ | | | | | | /----- XP_009135111.1 [Brassica rapa] (45) | | | | | \-100+ | | | | | \----- GSBRNA2T00111649001 [Brassica napus] (72) | | | \------99------+ | | | | /----- XP_013622519.1 [Brassica oleracea] (13) | | | | /-100+ | | | | | \----- GSBRNA2T00110507001 [Brassica napus] (63) | | | | /-100+ | | | | | | /----- GSBRNA2T00111648001 [Brassica napus] (14) | | | | | \-100+ | | /-91-+ \-100-+ \----- XP_009135112.1 [Brassica rapa] (48) | | | | | | | | | | /----- RrC1756_p1 [Raphanus raphanistrum] (24) /-85-+ | | | \---100---+ | | | | | \----- Rsa1.0_01363.1_g00002.1 [Raphanus sativus] (76) | | | | | | | | | | /----- GSBRNA2T00110954001 [Brassica napus] (6) | | | | | /-100+ | | | | | | \----- XP_013586773.1 [Brassica oleracea] (35) | | | | | /-100+ | | \--83-+ | | | /----- GSBRNA2T00000394001 [Brassica napus] (20) | | | | | \-99-+ | | | | /-100-+ \----- XP_009146834.1 [Brassica rapa] (55) | | | | | | | | | | | | /----- Rsa1.0_00544.1_g00004.1 [Raphanus sativus] (11) | | | \---------96--------+ \---100---+ | | | | \----- RrC16977_p1 [Raphanus raphanistrum] (25) | | | | | | | \--------------------- 676764948 [Sisymbrium irio] (43) | | | | | \---------------------------------------------- Tp3g08750 [Thellungiella parvula] (38) | | | | /----- KFK38437.1 [Arabis alpina] (33) | \-------------------------98------------------------+ | \----- Tp3g08740 [Thellungiella parvula] (41) | | /----- GSBRNA2T00004862001 [Brassica napus] (7) | /-100+ | | \----- EcS744841.10 [Eucalyptus camaldulensis] (80) | /-100+ | | \---------- Eucgr.G02740.1.p [Eucalyptus grandis] (42) | | | /-------86------+ /----- Neem_17921_f_1 [Azadirachta indica] (9) | | | /-100+ | | | | \----- Neem_13860_f_1 [Azadirachta indica] (79) | | \-100+ --91-+ | | /----- Ciclev10031606m [Citrus clementina] (46) | | \-100+ | | \----- orange1.1g014130m [Citrus sinensis] (60) | | | | /----- Gh_A05G2509 [Gossypium hirsutum] (15) | | /-99-+ | | | \----- Cotton_A_29173_BGI-A2_v1.0 [Gossypium arboreum] (58) | | /-100+ | | | | /----- Gh_D05G2787 [Gossypium hirsutum] (26) | /-64-+ | \-100+ | | | | \----- Gorai.009G309300.1 [Gossypium raimondii] (73) | | | /--67-+ | | | | | /----- Gh_A10G1796 [Gossypium hirsutum] (49) | | | | | /-100+ | | | | | | \----- Cotton_A_32478_BGI-A2_v1.0 [Gossypium arboreum] (61) | | | | \-100+ | | | /-90-+ | /----- Gorai.011G234200.1 [Gossypium raimondii] (67) | | | | | \-96-+ | | | | | \----- Gh_D10G2538 [Gossypium hirsutum] (75) | | | | | | /-88-+ | | \--------------------- Thecc1EG043357t1 [Theobroma cacao] (62) | | | \-100+ | | | | /----- Gorai.012G007000.1 [Gossypium raimondii] (16) | | | | /-76-+ | | | | | \----- Gh_D04G0050 [Gossypium hirsutum] (57) | | | \------100------+ | /-72-+ | | /----- Gh_A05G3555 [Gossypium hirsutum] (29) | | | | \-100+ | | | | \----- Cotton_A_06086_BGI-A2_v1.0 [Gossypium arboreum] (68) | | | | | | | \------------------------------------ evm.model.supercontig_53.164 [Carica papaya] (17) | | | \-------96------+ \----------------------------------------- KFK24890.1 [Arabis alpina] (52) | | /----- XP_010552945.1 [Tarenaya hassleriana] (36) |-------------------100------------------+ | \----- XP_010543579.1 [Tarenaya hassleriana] (70) | \---------------------------------------------- AA12G00161 [Aethionema arabicum] (54) Root part of tree: /------------------------------------------------------------------- Araha.4954s0010.1.p [Arabidopsis halleri] (1) | |------------------------------------------------------------------- 317848 [Arabidopsis lyrata] (32) | | /------ Cagra.0834s0029.1.p [Capsella grandiflora] (2) | /-----------------100----------------+ | | \------ Carubv10013694m [Capsella rubella] (28) | | | | /------------------------------------- (139) | | | | /--97-+ | /------ Csa19g014120.1 [Camelina sativa] (8) | | | | /--90-+ | | | | | \------ Csa01g011370.1 [Camelina sativa] (65) | | | | /-100-+ | | | | | \------------ Csa15g013990.1 [Camelina sativa] (77) | | \-100-+ /-100-+ + | | | | /------ Cagra.0834s0028.1.p [Capsella grandiflora] (12) | | | | \----100----+ | | | /--99-+ \------ Carubv10013564m [Capsella rubella] (31) | /--99-+ | | | | | | | | \------------------------ Bostr.22252s0011.1.p [Boechera stricta] (30) | | | | | | | | \--100-+ /------ Araha.4954s0011.1.p [Arabidopsis halleri] (18) | | | | /-100-+ | | | | | \------ 478382 [Arabidopsis lyrata] (23) | | | \-------100-------+ | /-100-+ | \------------ AT3G10490.2 [Arabidopsis thaliana] (47) | | | | | | | \------------------------------------------------- Bostr.22252s0012.1.p [Boechera stricta] (71) | | | | | | /------------ Csa19g014110.1 [Camelina sativa] (21) \--97-+ | | | \--------------------100-------------------+ /------ Csa01g011360.1 [Camelina sativa] (50) | \--67-+ | \------ Csa15g013970.1 [Camelina sativa] (66) | \------------------------------------------------------------- AT3G10480.3 [Arabidopsis thaliana] (64) |