PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM778
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 219: /---------- GSBRNA2T00057875001 [Brassica napus] (2) | /-91-+ /----- XP_013590906.1 [Brassica oleracea] (6) | \-83-+ | \----- GSBRNA2T00028935001 [Brassica napus] (8) /-100+ | | /----- XP_009104354.1 [Brassica rapa] (11) | \----97---+ /-100+ \----- GSBRNA2T00099070001 [Brassica napus] (50) | | | | /----- RrC22061_p1 [Raphanus raphanistrum] (16) | \------100-----+ | \----- Rsa1.0_02153.1_g00007.1 [Raphanus sativus] (118) | /-89-+ /----- 676749200 [Sisymbrium irio] (4) | | /------100-----+ | | | \----- 676749202 [Sisymbrium irio] (56) | | | | | | /----- GSBRNA2T00127050001 [Brassica napus] (9) | | | /-100+ | \-95-+ | \----- XP_013603484.1 [Brassica oleracea] (18) /--86-+ | | | | | /-100+---------- GSBRNA2T00049441001 [Brassica napus] (66) | | | | | | | \-100+ \---------- XP_009116860.1 [Brassica rapa] (96) | | | | | \--------------- RrC184_p2 [Raphanus raphanistrum] (52) | | | \------------------------------ Tp5g01440 [Thellungiella parvula] (58) | /-90-+ /----- 907751 [Arabidopsis lyrata] (24) | | /-100+ | | | \----- Araha.46415s0001.1.p [Arabidopsis halleri] (51) | | /---100---+ | | | \---------- AT3G61910.1 [Arabidopsis thaliana] (25) | | | | | | /----- Carubv10019223m [Capsella rubella] (26) | | | /-100+ | \-------98------+ | \----- Cagra.0483s0052.1.p [Capsella grandiflora] (89) /-90-+ | | | | | /-100+ /----- Csa05g094110.1 [Camelina sativa] (44) | | | | | | | | | | \-100+----- Csa07g002690.1 [Camelina sativa] (130) | | \-100+ | | | | \----- Csa16g002750.1 [Camelina sativa] (170) /-100+ | | | | | \--------------- Bostr.13158s0196.1.p [Boechera stricta] (91) | | | | | \----------------------------------------- KFK35377.1 [Arabis alpina] (87) | | /-82-+ \---------------------------------------------- AA61G00547 [Aethionema arabicum] (43) | | | | /----- XP_010525243.1 [Tarenaya hassleriana] (3) | | /-99-+ | | | \----- XP_010544875.1 [Tarenaya hassleriana] (117) | \-------------------90-------------------+ | \---------- XP_010559145.1 [Tarenaya hassleriana] (86) | | /----- GSBRNA2T00038201001 [Brassica napus] (5) | /-100+ | | \----- XP_013634628.1 [Brassica oleracea] (115) | /-57-+ | | \---------- XP_009142445.1 [Brassica rapa] (100) | | | /-100+ /----- Rsa1.0_00244.1_g00019.1 [Raphanus sativus] (20) | | | /-100+ | | | | \----- RrC12779_p1 [Raphanus raphanistrum] (59) | /-99-+ \-55-+ | | | \---------- GSBRNA2T00034316001 [Brassica napus] (60) | | | | | \-------------------- Tp4g28800 [Thellungiella parvula] (92) | | | | /----- GSBRNA2T00073188001 [Brassica napus] (7) | | /-100+ | /-100+ | \----- XP_013634739.1 [Brassica oleracea] (113) /-100+ | | /-68-+ | | | | | | /----- RrC4156_p1 [Raphanus raphanistrum] (68) | | | | | \-100+ | | | | /-100+ \----- Rsa1.0_02595.1_g00003.1 [Raphanus sativus] (90) | | | | | | | | /--63-+ | | | /----- XP_009142607.1 [Brassica rapa] (12) | | | | \-100+ \---100---+ | | | | | \----- GSBRNA2T00132929001 [Brassica napus] (28) | | | | | | | | | \-------------------- 676734780 [Sisymbrium irio] (110) | | | | | | | \------------------------------ Thhalv10001506m [Eutrema salsugineum] (33) | | | | | | /----- Araha.8989s0001.1.p [Arabidopsis halleri] (27) | | | | | | /-100+ /---------73--------+----- 904148 [Arabidopsis lyrata] (62) | | | | | | | | | | | \----- AT2G46770.1 [Arabidopsis thaliana] (76) | | | | | | | | | /-98-+ /----- Carubv10023503m [Capsella rubella] (63) | | | | | | /------100-----+ | | | | | | | \----- Cagra.0050s0024.1.p [Capsella grandiflora] (123) | | | | | | | | | | | | \-96-+ /--------------- Bostr.25993s0090.1.p [Boechera stricta] (78) | \------93------+ | | | | | | \--50-+ | | /----- Csa04g065900.1 [Camelina sativa] (97) | | | \-95-+ /-51-+ | | | | | \----- Csa05g002390.1 [Camelina sativa] (120) | | | \-100+ | | | \---------- Csa06g053280.1 [Camelina sativa] (111) | | | | | \------------------------------ KFK37442.1 [Arabis alpina] (40) | | | \----------------------------------------- AA21G00405 [Aethionema arabicum] (38) | | /----- GSBRNA2T00111390001 [Brassica napus] (10) | /-100+ | | \----- XP_013584744.1 [Brassica oleracea] (72) | /-100+ | | | /----- XP_009114859.1 [Brassica rapa] (13) | | \-100+ | /-100+ \----- GSBRNA2T00156597001 [Brassica napus] (83) | | | | | | /----- Rsa1.0_00808.1_g00003.1 [Raphanus sativus] (85) | /-100+ \---100---+ | | | \----- RrC2769_p1 [Raphanus raphanistrum] (98) | | | | | \-------------------- 676737560 [Sisymbrium irio] (42) | | --87-+ | /----- Rsa1.0_00043.1_g00018.1 [Raphanus sativus] (32) | | /---100---+ | | | \----- RrC8893_p1 [Raphanus raphanistrum] (39) | /-95-+ | | | |---100---+ /---------- GSBRNA2T00106315001 [Brassica napus] (35) | | | | | | | | \-100+ /----- XP_009151451.1 [Brassica rapa] (49) | | | \-95-+ | /--67-+ | \----- GSBRNA2T00036630001 [Brassica napus] (82) | | | | | | | \------------------------- Tp1g28190 [Thellungiella parvula] (41) | | | | | | /----- KFK45026.1 [Arabis alpina] (19) | | \-----------88-----------+ | | \----- Thhalv10009336m [Eutrema salsugineum] (79) | | | /-88-+------------------------------------ Bostr.3359s0081.1.p [Boechera stricta] (14) | | | | | | /---------- AT1G32770.1 [Arabidopsis thaliana] (45) | | | | | | | /----72---+ /----- 313839 [Arabidopsis lyrata] (57) | | | | \-89-+ | | | | \----- Araha.40634s0001.1.p [Arabidopsis halleri] (119) | | | | | | \-------75------+ /----- Cagra.14513s0001.1.p [Capsella grandiflora] (53) | /-100+ | /---100---+ | | | | | \----- Carubv10011900m [Capsella rubella] (114) | | | | | | | | \-100+ /----- Csa14g042710.1 [Camelina sativa] (88) | | | | /-100+ | | | | | \----- Csa03g037070.1 [Camelina sativa] (160) | /-100+ | \-100+ | | | | \---------- Csa17g054170.1 [Camelina sativa] (180) | | | | | | | \----------------------------------------- AA54G00226 [Aethionema arabicum] (99) | | | | | | /----- XP_010541977.1 [Tarenaya hassleriana] (36) | | \-------------------100------------------+ | | \----- XP_010538860.1 [Tarenaya hassleriana] (67) | | | | /----- Gh_D03G0775 [Gossypium hirsutum] (15) | | /-100+ | | | \----- Gorai.003G077700.1 [Gossypium raimondii] (77) | | /------100-----+ | | | | /----- Cotton_A_31522_BGI-A2_v1.0 [Gossypium arboreum] (17) | | | \-85-+ | | | \----- Gh_A02G0977 [Gossypium hirsutum] (84) | | | | | | /----- Gorai.008G259700.1 [Gossypium raimondii] (22) \----95---+ | /-99-+ | | | \----- Gh_D12G2359 [Gossypium hirsutum] (95) | |------100-----+ | | | /----- Cotton_A_13198_BGI-A2_v1.0 [Gossypium arboreum] (48) | | \-100+ | | \----- Gh_A12G2179 [Gossypium hirsutum] (120) | | | | /----- Cotton_A_08128_BGI-A2_v1.0 [Gossypium arboreum] (31) | | /-100+ | | | \----- Gh_A09G2371 [Gossypium hirsutum] (140) | | /-100+ | | | | /----- Gh_D09G1785 [Gossypium hirsutum] (65) | | | \-100+ | | | \----- Gorai.006G205300.1 [Gossypium raimondii] (80) | | /-52-+ | | | | /---------- Gorai.004G129200.1 [Gossypium raimondii] (47) | | | | | \------------93-----------+ | | | /----- Gh_A08G0961 [Gossypium hirsutum] (55) | | \-100+-100+ |-51-+ | \----- Cotton_A_39966_BGI-A2_v1.0 [Gossypium arboreum] (81) | | | | | \---------- Gh_D08G1172 [Gossypium hirsutum] (75) | | | \-------------------- Thecc1EG015621t1 [Theobroma cacao] (74) | | /----- Ciclev10021141m [Citrus clementina] (34) | /-100+ | | \----- orange1.1g014260m [Citrus sinensis] (116) |------100-----+ | | /----- Neem_12571_f_1 [Azadirachta indica] (46) | \-100+ | \----- Neem_10484_f_1 [Azadirachta indica] (112) | | /---------- Eucgr.D01671.1.p [Eucalyptus grandis] (37) | | |------93------+ /----- EcC054635.10 [Eucalyptus camaldulensis] (61) | \-100+ | \----- Eucgr.E01053.1.p [Eucalyptus grandis] (93) | \------------------------- evm.model.supercontig_37.89 [Carica papaya] (190) Root part of tree: /------------------------------------------------------------------ Ciclev10024035m [Citrus clementina] (1) | |------------------------------------------------------------------ orange1.1g015853m [Citrus sinensis] (73) | | /------------------------------------------------- (219) | | | | /---------------- Gh_D11G1062 [Gossypium hirsutum] (21) | | | | | | /-------- Gh_A11G0915 [Gossypium hirsutum] (94) | | /-----------100----------+--100--+ | | | | \-------- Cotton_A_15646_BGI-A2_v1.0 [Gossypium arboreum] (121) + /---91---+ | | | | | | \---------------- Gorai.007G112500.1 [Gossypium raimondii] (122) | | | | | | | | /---------------- Gh_A12G1049 [Gossypium hirsutum] (23) | | | | | | | | | | /-------- Gh_D12G1169 [Gossypium hirsutum] (54) | | | | /---100--+--100--+ | | \---97--+ | | \-------- Gorai.008G130300.1 [Gossypium raimondii] (64) | | | | | | | | | \---------------- Cotton_A_26426_BGI-A2_v1.0 [Gossypium arboreum] (70) | | | /---87--+ \--100--+ | | | /-------- Gh_D07G1330 [Gossypium hirsutum] (29) | | | | /--100--+ | | | | | \-------- Gorai.001G150800.1 [Gossypium raimondii] (110) | | | \---100--+ | \---80--+ | /-------- Cotton_A_36063_BGI-A2_v1.0 [Gossypium arboreum] (30) | | \--100--+ | | \-------- Gh_A07G1226 [Gossypium hirsutum] (124) | | | \--------------------------------- Thecc1EG005047t1 [Theobroma cacao] (69) | | /-------- Neem_14495_f_1 [Azadirachta indica] (71) \------------------------96-----------------------+ \-------- Neem_32940_f_1 [Azadirachta indica] (150) |