PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM482
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 227: /----- GSBRNA2T00155884001 [Brassica napus] (2) /-100+ | \----- XP_013601684.1 [Brassica oleracea] (142) /-100+ | | /----- GSBRNA2T00122033001 [Brassica napus] (93) | \-100+ /---100---+ \----- XP_009124032.1 [Brassica rapa] (132) | | | | /----- Rsa1.0_01944.1_g00005.1 [Raphanus sativus] (55) | \---100---+ | \----- RrC2517_p6 [Raphanus raphanistrum] (56) | | /----- XP_009116400.1 [Brassica rapa] (22) | /-100+ | | \----- GSBRNA2T00122035001 [Brassica napus] (30) | /-100+ | | | /----- GSBRNA2T00014555001 [Brassica napus] (36) | | \-99-+ | /-100+ \----- XP_013603898.1 [Brassica oleracea] (88) | | | | | | /----- Rsa1.0_01944.1_g00001.1 [Raphanus sativus] (58) | | \---100---+ | | \----- RrC18427_p1 [Raphanus raphanistrum] (125) | | /-76-+-99-+ /----- GSBRNA2T00142644001 [Brassica napus] (45) | | | /-100+ | | | | \----- XP_013596868.1 [Brassica oleracea] (120) | | | /-100+ | | | | | /----- XP_009102593.1 [Brassica rapa] (59) | | | | \-100+ | | \-100+ \----- GSBRNA2T00128359001 [Brassica napus] (113) | | | | | | /----- RrC7233_p1 [Raphanus raphanistrum] (49) | | \---100---+ | | \----- Rsa1.0_05924.1_g00001.1 [Raphanus sativus] (131) | | | | /----- XP_009116401.1 [Brassica rapa] (33) | | /-100+ | | | \----- GSBRNA2T00122034001 [Brassica napus] (110) /-100-+ | /-100+ | | | | | /----- GSBRNA2T00155885001 [Brassica napus] (120) | | | | \-100+ | | \---100---+ \----- XP_013603891.1 [Brassica oleracea] (137) | | | | | | /----- RrC23068_p1 [Raphanus raphanistrum] (51) | | \---100---+ | | \----- Rsa1.0_01944.1_g00003.1 [Raphanus sativus] (134) | | | | /----- GSBRNA2T00128360001 [Brassica napus] (42) | | /-100+ /-95-+ | | \----- XP_009102594.1 [Brassica rapa] (170) | | | /-100+ | | | | | /----- GSBRNA2T00011390001 [Brassica napus] (123) | | | | \-88-+ | | \------100-----+ \----- XP_013597233.1 [Brassica oleracea] (148) | | | | | | /----- Rsa1.0_01167.1_g00005.1 [Raphanus sativus] (143) | | \---100---+ | | \----- RrC2601_p2 [Raphanus raphanistrum] (147) | | /-100+ \------------------------------------ 676785262 [Sisymbrium irio] (146) | | | | /----- GSBRNA2T00098842001 [Brassica napus] (41) | | /-100+ | | | \----- XP_009105533.1 [Brassica rapa] (96) | | /---100---+ | | | \---------- XP_013590939.1 [Brassica oleracea] (91) | | | | | | /----- Rsa1.0_07076.1_g00001.1 [Raphanus sativus] (48) | \---------100--------+ /---100---+ | | | \----- RrC186_p2 [Raphanus raphanistrum] (117) | | | | \-100+ /----- XP_009104034.1 [Brassica rapa] (89) | | /-97-+ | | | \----- GSBRNA2T00098841001 [Brassica napus] (112) | \-100+ | \---------- XP_013591139.1 [Brassica oleracea] (115) | | /----- RrC6757_p1 [Raphanus raphanistrum] (7) | /--------100--------+ | | \----- Rsa1.0_02882.1_g00001.1 [Raphanus sativus] (80) | | | | /----- GSBRNA2T00126251001 [Brassica napus] (31) | /-99-+ /------97------+ | | | | \----- XP_009139054.1 [Brassica rapa] (136) | | | | | | | | /---------- GSBRNA2T00091489001 [Brassica napus] (32) | | \-89-+ | | | | /-100+ /----- XP_013615108.1 [Brassica oleracea] (57) | | | | \-97-+ | /--57-+ | | \----- GSBRNA2T00069228001 [Brassica napus] (129) | | | \-63-+ /-82-+ | | |--------------- GSBRNA2T00126258001 [Brassica napus] (66) | | | | | | | /-82-+ | \--------------- GSBRNA2T00087298001 [Brassica napus] (110) | | | | | | | | | \------------------------------ KFK34930.1 [Arabis alpina] (75) | | | | | | | \------------------------------------ 676785260 [Sisymbrium irio] (119) | | | | | | /----- Thhalv10006191m [Eutrema salsugineum] (11) | | |----------------100----------------+ | | | \----- Thhalv10006189m [Eutrema salsugineum] (68) | |-61-+ | | | /---------- GSBRNA2T00087296001 [Brassica napus] (62) | | | | | | | /---100---+ /----- XP_009139056.1 [Brassica rapa] (67) | | | | \-100+ | | | | \----- GSBRNA2T00126250001 [Brassica napus] (138) | | | | | | | | /----- XP_009139052.1 [Brassica rapa] (82) | | \---------93---------+ /-100+ | | | | \----- GSBRNA2T00126257001 [Brassica napus] (85) | | | /-100+ | | | | \---------- 676785258 [Sisymbrium irio] (141) | | \-100+ | | \--------------- Tp5g05600 [Thellungiella parvula] (150) /-74-+ | | | | /----- Araha.49678s0001.1.p [Arabidopsis halleri] (9) | | | /-94-+ | | | | \----- 324207 [Arabidopsis lyrata] (34) | | | /-100+ | | | | \---------- AT3G56980.1 [Arabidopsis thaliana] (39) | | | | | | \--------------100-------------+ /----- Cagra.0578s0028.1.p [Capsella grandiflora] (29) | | | /-100+ | | | | \----- Carubv10017770m [Capsella rubella] (149) | | \-100+ | | \---------- Bostr.20505s0055.1.p [Boechera stricta] (98) | | | | /----- GSBRNA2T00126249001 [Brassica napus] (6) /-57-+ | | | | | /-100+----- GSBRNA2T00087293001 [Brassica napus] (13) | | | | | | | | /-100+ \----- XP_009139058.1 [Brassica rapa] (133) | | | | | | | | /-100+ \---------- GSBRNA2T00087295001 [Brassica napus] (130) | | | | | | | |--------------72--------------+ \--------------- XP_013634961.1 [Brassica oleracea] (46) | | | | | | | \-------------------- 676785256 [Sisymbrium irio] (60) | | | | | \--------------------------------------------------- Tp5g05610 [Thellungiella parvula] (44) | | | \-------------------------------------------------------- Thhalv10006491m [Eutrema salsugineum] (86) --50-+ | /---------- AT3G56970.1 [Arabidopsis thaliana] (4) | | | /---100---+ /----- Araha.0887s0006.1.p [Arabidopsis halleri] (43) | | \-100+ | | \----- 486140 [Arabidopsis lyrata] (90) | | | | /----- Csa06g031690.1 [Camelina sativa] (8) | /-67-+ /-100+ | | | | \----- Csa04g043360.1 [Camelina sativa] (140) | | | /-100+ | | | | \---------- Csa09g069400.1 [Camelina sativa] (14) | | \-96-+ \----------------100----------------+ | /----- Carubv10019130m [Capsella rubella] (79) | \---100---+ | \----- Cagra.0578s0027.1.p [Capsella grandiflora] (180) | \------------------------- Bostr.20505s0056.1.p [Boechera stricta] (130) Subtree rooted at node 281: /---------- (227) | /-------------------76-------------------+ /----- AA61G00160 [Aethionema arabicum] (25) | \-100+ | \----- AA61G00163 [Aethionema arabicum] (114) | | /----- XP_010543098.1 [Tarenaya hassleriana] (3) |----------------------85---------------------+ | \----- XP_010554771.1 [Tarenaya hassleriana] (16) | | /------------------------- Tp6g38600 [Thellungiella parvula] (10) | | | | /-------------------- 676718060 [Sisymbrium irio] (12) | /-53-+ | | | | | /----- GSBRNA2T00134310001 [Brassica napus] (15) | | | | /-66-+ | | \-63-+ | \----- XP_013626414.1 [Brassica oleracea] (17) | | | /-100+ | | | | \---------- XP_009130802.1 [Brassica rapa] (77) | | \-100+ | | | /----- Rsa1.0_00285.1_g00009.1 [Raphanus sativus] (61) | | \---100---+ | | \----- RrC16589_p1 [Raphanus raphanistrum] (76) | | | | /----- Araha.30177s0007.1.p [Arabidopsis halleri] (19) | | /-93-+ | /--61-+ | \----- 860820 [Arabidopsis lyrata] (100) | | | /---100---+ | | | | \---------- AT5G04150.1 [Arabidopsis thaliana] (152) | | | | | | | | /----- Csa20g005340.1 [Camelina sativa] (21) | | | | | | | | | /-100+----- Csa13g006180.1 [Camelina sativa] (52) | | | /-100+ | | | | | | | | \----- Csa08g060370.1 [Camelina sativa] (64) | /-100+ | | | /-80-+ /-68-+ | | | | | | | /----- Carubv10001734m [Capsella rubella] (47) | | | | | | | | \-100+ | | | | \-74-+ \-100+ \----- Cagra.0878s0006.1.p [Capsella grandiflora] (72) | | | | | | | | | | | \--------------- Bostr.2128s0031.1.p [Boechera stricta] (150) | | /-86-+ | | | | | | | \------------------------- Thhalv10014371m [Eutrema salsugineum] (87) | | | | | | | | | \------------------------------------ KFK24862.1 [Arabis alpina] (139) | | | | | | | \----------------------------------------- XP_010543534.1 [Tarenaya hassleriana] (151) | | | | | | /----- Cotton_A_01739_BGI-A2_v1.0 [Gossypium arboreum] (23) | | | /-100+ | | | | \----- Gh_A09G0994 [Gossypium hirsutum] (71) | | | /-100+ | | | | \---------- Gorai.006G120300.1 [Gossypium raimondii] (24) | | | /-100+ | | | | \--------------- Gh_D09G1014 [Gossypium hirsutum] (153) | | | | | | | | /----- Cotton_A_01066_BGI-A2_v1.0 [Gossypium arboreum] (28) | | | | /-100+ | | | | | \----- Gh_A05G0570 [Gossypium hirsutum] (190) | | | /-100+---100---+ | | | | | | /----- Gh_D05G0699 [Gossypium hirsutum] (160) | | | | | \-100+ | | | | | \----- Gorai.009G073100.1 [Gossypium raimondii] (118) | | | | | | | | | \-------------------- Thecc1EG040699t1 [Theobroma cacao] (97) | | | /-88-+ | | | | | /----- Eucgr.A02250.1.p [Eucalyptus grandis] (37) | | | | | /---100---+ | | | | | | \----- EcS540524.10 [Eucalyptus camaldulensis] (127) | \-54-+ | | | | | | \---100---+ /----- EcC004408.10 [Eucalyptus camaldulensis] (63) | | | | /-99-+ | | | | | \----- Eucgr.B01226.1.p [Eucalyptus grandis] (121) /-51-+ | | \-100+ | | | | \---------- Eucgr.B01225.1.p [Eucalyptus grandis] (73) | | | | | | |-------78------+ /---------- Neem_859_f_1 [Azadirachta indica] (35) | | | | | | | | | /-100+ /----- Neem_1537_f_2 [Azadirachta indica] (54) | | | | | \-100+ | | | | | \----- Neem_40430_f_1 [Azadirachta indica] (78) | | | | /-95-+ | | | | | | /----- orange1.1g025477m [Citrus sinensis] (124) | | | | | \---100---+ | | | | | \----- Ciclev10006413m [Citrus clementina] (128) | | | | | | | | | | /----- Gorai.007G353000.1 [Gossypium raimondii] (81) | | | \----85---+ /-54-+ | | | | | \----- Gh_D11G3081 [Gossypium hirsutum] (111) | | | | /-100+ | | | | | | /----- Gh_A11G2752 [Gossypium hirsutum] (84) | | | | | \-90-+ | | | \-100+ \----- Cotton_A_14318_BGI-A2_v1.0 [Gossypium arboreum] (92) | | | | | | | \--------------- Thecc1EG024315t1 [Theobroma cacao] (135) --68-+ | | | | \---------------------------------------------- evm.model.supercontig_5.180 [Carica papaya] (140) | | | | /----- Carubv10023940m [Capsella rubella] (5) | | /---100---+ | | | \----- Cagra.1642s0089.1.p [Capsella grandiflora] (70) | | | | | /-100+ /----- Csa06g047140.1 [Camelina sativa] (50) | | | | /-94-+ | | | | | \----- Csa04g055660.1 [Camelina sativa] (94) | | /-100+ \-100+ | | | | \---------- Csa05g011400.1 [Camelina sativa] (69) | | | | | | | \-------------------- Bostr.9345s0006.1.p [Boechera stricta] (18) | \--------------97--------------+ | | /----- 870571 [Arabidopsis lyrata] (27) | | /-100+ | | | \----- Araha.13526s0009.1.p [Arabidopsis halleri] (126) | \------100-----+ | \---------- AT2G41240.1 [Arabidopsis thaliana] (122) | \------------------------------------------------------------- Thhalv10017167m [Eutrema salsugineum] (38) Root part of tree: /------------------------------------------------------------------ GSBRNA2T00105356001 [Brassica napus] (1) | |------------------------------------------------------------------ GSBRNA2T00027961001 [Brassica napus] (116) | | /-------- (281) | /---66--+ | | \-------- Tp4g23560 [Thellungiella parvula] (95) | /-----------68-----------+ | | \---------------- 676756222 [Sisymbrium irio] (99) | | | | /-------- XP_009141976.1 [Brassica rapa] (20) + | /--100--+ | /---71--+ | \-------- GSBRNA2T00123239001 [Brassica napus] (26) | | | /---59---+ | | | | \---------------- XP_013635306.1 [Brassica oleracea] (145) | | | /--100--+ | | | | \------------------------- GSBRNA2T00084613001 [Brassica napus] (144) | | \--100--+ | /---100--+ | /-------- Rsa1.0_18971.1_g00001.1 [Raphanus sativus] (40) | | | \-----------100----------+ | | | \-------- RrC12416_p1 [Raphanus raphanistrum] (74) | | | \--100--+ | /-------- GSBRNA2T00024289001 [Brassica napus] (53) | \-------------------95-------------------+ | \-------- XP_013635081.1 [Brassica oleracea] (83) | \---------------------------------------------------------- XP_009142733.1 [Brassica rapa] (65) |