PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Phylogenetic Tree for OGEM2022
Phylogenetic tree for protein ? help Back to Top

      Subtree rooted at node 108:

                                                                    /----- Carubv10012162m [Capsella rubella]                    (2)
                                                          /---100---+                 
                                                          |         \----- Cagra.4122s0002.1.p [Capsella grandiflora]            (21)
                                                          |                           
                                                          |         /----- Csa03g059130.1 [Camelina sativa]                      (29)
                                                    /-100-+         |                 
                                                    |     |    /-100+----- Csa17g092100.1 [Camelina sativa]                      (56)
                                                    |     |    |    |                 
                                                    |     \-100+    \----- Csa14g060390.1 [Camelina sativa]                      (57)
                                                    |          |                      
                                     /------100-----+          \---------- Bostr.0124s0004.1.p [Boechera stricta]                (55)
                                     |              |                                 
                                     |              |               /----- 314555 [Arabidopsis lyrata]                           (6)
                                     |              |          /-74-+                 
                                     |              |          |    \----- AT1G52150.2 [Arabidopsis thaliana]                    (30)
                                     |              \----55----+                      
                                     |                         \---------- Araha.2499s0002.1.p [Arabidopsis halleri]             (15)
                                     |                                                
                                     |              /--------------------- Rsa1.0_00125.1_g00012.1 [Raphanus sativus]            (14)
                                     |              |                                 
                                     |              |               /----- GSBRNA2T00114236001 [Brassica napus]                  (18)
                                     |              |          /-99-+                 
                                     |         /-100+          |    \----- XP_009107147.1 [Brassica rapa]                        (65)
                                /-100+         |    |     /-62-+                      
                                |    |         |    |     |    \---------- GSBRNA2T00098397001 [Brassica napus]                  (31)
                                |    |         |    \-100-+                           
                                |    |         |          \--------------- XP_013621760.1 [Brassica oleracea]                    (41)
                                |    |    /-100+                                      
                                |    |    |    |                    /----- RrC974_p5 [Raphanus raphanistrum]                     (16)
                                |    |    |    |          /---100---+                 
                                |    |    |    |          |         \----- Rsa1.0_03390.1_g00004.1 [Raphanus sativus]            (34)
                                |    |    |    |          |                           
                                |    |    |    \----100---+         /----- GSBRNA2T00029833001 [Brassica napus]                  (26)
                                |    |    |               |    /-97-+                 
                                |    |    |               |    |    \----- XP_009147709.1 [Brassica rapa]                        (48)
                           /-100+    \-100+               \-100+                      
                           |    |         |                    |    /----- GSBRNA2T00088278001 [Brassica napus]                  (62)
                           |    |         |                    \-100+                 
                           |    |         |                         \----- XP_013592012.1 [Brassica oleracea]                    (64)
                           |    |         |                                           
                           |    |         |                    /---------- 676786782 [Sisymbrium irio]                           (33)
                           |    |         |                    |                      
                     /-100-+    |         \---------80---------+    /----- Thhalv10011238m [Eutrema salsugineum]                 (53)
                     |     |    |                              \-95-+                 
                     |     |    |                                   \----- Tp1g38700 [Thellungiella parvula]                     (71)
                     |     |    |                                                     
                     |     |    \----------------------------------------- AA15G00017 [Aethionema arabicum]                      (40)
                     |     |                                                          
                     |     |                                        /----- XP_010535179.1 [Tarenaya hassleriana]                 (17)
                /-82-+     \-------------------100------------------+                 
                |    |                                              \----- XP_010545669.1 [Tarenaya hassleriana]                 (50)
                |    |                                                                
                |    |                                              /----- Ciclev10024891m [Citrus clementina]                   (4)
                |    |                                         /-100+                 
                |    |                                         |    \----- orange1.1g048771m [Citrus sinensis]                   (54)
           /-100+    \-------------------100-------------------+                      
           |    |                                              \---------- Neem_2214_f_1 [Azadirachta indica]                    (11)
           |    |                                                                     
           |    |                                              /---------- Thecc1EG028866t1 [Theobroma cacao]                    (22)
           |    |                                              |                      
           |    |                                              |    /----- Gh_A05G1085 [Gossypium hirsutum]                      (37)
           |    \----------------------100---------------------+    |                 
      --100+                                                   |    |----- Gh_D05G1263 [Gossypium hirsutum]                      (45)
           |                                                   \-100+                 
           |                                                        |----- Gorai.009G136800.1 [Gossypium raimondii]              (69)
           |                                                        |                 
           |                                                        \----- Cotton_A_05396_BGI-A2_v1.0 [Gossypium arboreum]       (70)
           |                                                                          
           \-------------------------------------------------------------- Eucgr.F03066.1.p [Eucalyptus grandis]                 (58)
                                                                                      
      Subtree rooted at node 143:

                                                          /--------------- (108)
                                                          |                           
                                                          |         /----- Rsa1.0_13763.1_g00001.1 [Raphanus sativus]            (24)
                                                    /--86-+    /-100+                 
                                                    |     |    |    \----- Csa18g034040.1 [Camelina sativa]                      (39)
                                                    |     \-100+                      
                                               /-79-+          \---------- Neem_29055_f_1 [Azadirachta indica]                   (44)
                                               |    |                                 
                                               |    |               /----- Eucgr.C00605.1.p [Eucalyptus grandis]                 (61)
                                               |    \------100------+                 
                                               |                    \----- EcC051199.10 [Eucalyptus camaldulensis]               (67)
                     /------------80-----------+                                      
                     |                         |                    /----- Ciclev10007435m [Citrus clementina]                   (20)
                     |                         |               /-100+                 
                     |                         |               |    \----- orange1.1g003071m [Citrus sinensis]                   (72)
                     |                         \-------94------+                      
                     |                                         \---------- Neem_11133_f_6 [Azadirachta indica]                   (52)
                     |                                                                
                     |                                              /----- Araha.17232s0001.1.p [Arabidopsis halleri]            (5)
                     |                                         /-100+                 
                     |                                         |    \----- 491408 [Arabidopsis lyrata]                           (63)
                     |                                    /-100+                      
                     |                                    |    \---------- AT4G32880.1 [Arabidopsis thaliana]                    (38)
                     |                              /--64-+                           
                     |                              |     \--------------- Bostr.7867s1139.1.p [Boechera stricta]                (46)
                     |                              |                                 
                     |                              |               /----- Csa10g009430.1 [Camelina sativa]                      (7)
                     |                         /-100+               |                 
                     |                         |    |          /-100+----- Csa12g012990.1 [Camelina sativa]                      (9)
                     |                         |    |          |    |                 
                     |                         |    |          |    \----- Csa11g010300.1 [Camelina sativa]                      (23)
                     |                         |    \----83----+                      
                     |                    /-92-+               |    /----- Carubv10004127m [Capsella rubella]                    (68)
                     |                    |    |               \-100+                 
                /-100+                    |    |                    \----- Cagra.4093s0017.1.p [Capsella grandiflora]            (73)
                |    |                    |    |                                      
                |    |                    |    \-------------------------- Thhalv10024403m [Eutrema salsugineum]                 (78)
                |    |                    |                                           
                |    |                    |               /--------------- XP_013622315.1 [Brassica oleracea]                    (10)
                |    |                    |               |                           
                |    |                    |               |         /----- GSBRNA2T00040012001 [Brassica napus]                  (13)
                |    |                    |------100------+    /-100+                 
                |    |                    |               |    |    \----- GSBRNA2T00081269001 [Brassica napus]                  (35)
                |    |               /-83-+               \-53-+                      
                |    |               |    |                    \---------- XP_009108824.1 [Brassica rapa]                        (47)
                |    |               |    |                                           
                |    |               |    |                         /----- XP_009125299.1 [Brassica rapa]                        (12)
                |    |               |    |                    /-100+                 
                |    |               |    |                    |    \----- GSBRNA2T00088471001 [Brassica napus]                  (19)
                |    |               |    |               /-100+                      
           /-95-+    |          /-100+    |               |    \---------- Rsa1.0_00017.1_g00136.1 [Raphanus sativus]            (36)
           |    |    |          |    |    |-------54------+                           
           |    |    |          |    |    |               \--------------- RrC810_p1 [Raphanus raphanistrum]                     (25)
           |    |    |          |    |    |                                           
           |    |    |     /-100+    |    \------------------------------- Tp7g30650 [Thellungiella parvula]                     (43)
           |    |    |     |    |    |                                                
           |    |    |     |    |    \------------------------------------ 676780838 [Sisymbrium irio]                           (51)
           |    |    \-100-+    |                                                     
           |    |          |    \----------------------------------------- AA651G00001 [Aethionema arabicum]                     (76)
           |    |          |                                                          
           |    |          \---------------------------------------------- XP_010526102.1 [Tarenaya hassleriana]                 (75)
           |    |                                                                     
      --100+    |                                                   /----- Gh_A06G0833 [Gossypium hirsutum]                      (3)
           |    |                                              /-99-+                 
           |    |                                              |    \----- Cotton_A_22259_BGI-A2_v1.0 [Gossypium arboreum]       (66)
           |    \----------------------100---------------------+                      
           |                                                   |    /----- Gh_D06G0966 [Gossypium hirsutum]                      (32)
           |                                                   \-100+                 
           |                                                        \----- Gorai.010G105900.1 [Gossypium raimondii]              (60)
           |                                                                          
           |                                                        /----- Gh_A05G0364 [Gossypium hirsutum]                      (42)
           |                                                   /-74-+                 
           |                                                   |    \----- Cotton_A_20473_BGI-A2_v1.0 [Gossypium arboreum]       (49)
           \------------------------100------------------------+                      
                                                               |    /----- Gorai.009G049100.1 [Gossypium raimondii]              (59)
                                                               \-100+                 
                                                                    \----- Gh_D05G0479 [Gossypium hirsutum]                      (77)
                                                                                      
      Root part of tree:

      /------------------------------------------------------------------- Gh_D07G0220 [Gossypium hirsutum]                      (1)
      |                                                                               
      |------------------------------------------------------------------- Gorai.001G026800.1 [Gossypium raimondii]              (27)
      |                                                                               
      +                                            /---------------------- (143)
      |                     /----------100---------+                                  
      |                     |                      \---------------------- Thecc1EG037207t1 [Theobroma cacao]                    (28)
      \---------100---------+                                                         
                            |                      /---------------------- Gh_A07G0163 [Gossypium hirsutum]                      (8)
                            \----------99----------+                                  
                                                   \---------------------- Cotton_A_07197_BGI-A2_v1.0 [Gossypium arboreum]       (74)