PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEA598
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Subtree rooted at node 192: /--------------- cra_locus_16831_iso_1 [Catharanthus roseus] (2) | | /----- Cc02_g28190 [Coffea canephora] (36) | /-96-+ | | \----- Cc02_g28210 [Coffea canephora] (84) |-100+ /--------------62--------------+ \---------- Cc02_g03660 [Coffea canephora] (59) | | | | /----- Migut.F00404.1.p [Mimulus guttatus] (40) | | /-63-+ | | | \----- XP_011076501.1 [Sesamum indicum] (76) | \-66-+ | \---------- SMil_00015939-RA_Salv [Salvia miltiorrhiza] (69) | | /----- Solyc06g035490.2.1 [Solanum lycopersicum] (5) | /-100+ | | \----- Sopim06g035490.0.1 [Solanum pimpinellifolium] (180) | /-100+ | | \---------- Sopen06g011230.1 [Solanum pennellii] (20) | /---100---+ | | | /----- CA06g06440 [Capsicum annuum] (32) | | \----97---+ | | \----- Sme2.5_00735.1_g00008.1 [Solanum melongena] (74) | | | | /----- XP_016452590.1 [Nicotiana tabacum] (8) | /-100+ /-100+ | | | | \----- XP_009804982.1 [Nicotiana sylvestris] (30) /-61-+ | | /-78-+ | | | | | \---------- Niben101Scf10974g01004.1 [Nicotiana benthamiana] (140) | | | | /-100+ | | /-100-+ | | \--------------- Niben101Scf02420g08014.1 [Nicotiana benthamiana] (19) | | | | \-100+ | | | | \-------------------- XP_009616845.1 [Nicotiana tomentosiformis] (66) | | | | | | | | /----- Peinf101Scf00371g03012.1 [Petunia inflata] (13) | | | \-----------100----------+ | | | \----- Peaxi162Scf01178g00113.1 [Petunia axillaris] (130) | | | | | | /---------- Niben101Scf02955g01007.1 [Nicotiana benthamiana] (21) | | | | | | /-100+ /-100+ /----- XP_009801444.1 [Nicotiana sylvestris] (64) | | | | | \-100+ | | | | | \----- XP_016489170.1 [Nicotiana tabacum] (77) | | | | /-100+ | | | | | | /----- XP_009624566.1 [Nicotiana tomentosiformis] (41) | | | | | \---100---+ | | | | /-100+ \----- XP_016443890.1 [Nicotiana tabacum] (46) | \-100+ | | | | | | | \-------------------- Niben101Scf11805g02005.1 [Nicotiana benthamiana] (42) | | \----100---+ | | | /----- Peaxi162Scf00192g00715.1 [Petunia axillaris] (37) /-72-+ | \--------100--------+ | | | \----- Peinf101Scf01452g03021.1 [Petunia inflata] (91) | | | | | \----------------------------------------- Itr_sc003191.1_g00002.1 [Ipomoea trifida] (16) | | | | /----- Achn233831 [Actinidia chinensis] (4) | | /-100+ | | | \----- Achn354401 [Actinidia chinensis] (97) | |-------------------74-------------------+ | | \---------- DCAR_018135 [Daucus carota] (88) | | | | /----- Cc08_g13690 [Coffea canephora] (24) | | /-97-+ | | | \----- Cc08_g13700 [Coffea canephora] (71) | | /-86-+ | | | \---------- cra_locus_9820_iso_1 [Catharanthus roseus] (57) | | | | |-----------------84----------------+--------------- Itr_sc000682.1_g00004.1 [Ipomoea trifida] (27) | | | | | | /----- Achn092921 [Actinidia chinensis] (51) | | \----88---+ | | \----- Achn361761 [Actinidia chinensis] (99) | | | | /----- Achn233841 [Actinidia chinensis] (31) | \---------------------100---------------------+ | \----- Achn354411 [Actinidia chinensis] (53) | | /----- SMil_00026150-RA_Salv [Salvia miltiorrhiza] (9) | /---100---+ | | \----- SMil_00003984-RA_Salv [Salvia miltiorrhiza] (18) | | | /-100+ /----- SMil_00026336-RA_Salv [Salvia miltiorrhiza] (65) | | | /-100+ | | | | \----- SMil_00001369-RA_Salv [Salvia miltiorrhiza] (85) | | \-100+ | | \---------- SMil_00026151-RA_Salv [Salvia miltiorrhiza] (100) | /-76-+ | | | /----- XP_011076270.1 [Sesamum indicum] (50) | | | /-57-+ | | | | \----- XP_011076504.1 [Sesamum indicum] (190) | | \----91---+ | /-92-+ \---------- XP_011076269.1 [Sesamum indicum] (86) | | | | | | /----- Migut.F00405.1.p [Mimulus guttatus] (67) | | | /-99-+ | | | | \----- Migut.H00770.1.p [Mimulus guttatus] (150) | | \------100-----+ | | \---------- Migut.F01201.1.p [Mimulus guttatus] (83) | | | | /----- XP_011101193.1 [Sesamum indicum] (14) | | /----74---+ | | | \----- KZV51892.1 [Dorcoceras hygrometricum] (33) | | | | | | /---------- XP_011076503.1 [Sesamum indicum] (28) /-89-+ | | | | | |------72------+-91-+ /----- SMil_00001370-RA_Salv [Salvia miltiorrhiza] (60) | | | | \-93-+ | |------------76-----------+ | \----- SMil_00026337-RA_Salv [Salvia miltiorrhiza] (110) | | | | | | | \--------------- KZV14558.1 [Dorcoceras hygrometricum] (120) | | | | | | /----- SMil_00012209-RA_Salv [Salvia miltiorrhiza] (17) | | |-----------86-----------+ | | | \----- Ote100278360041 [Ocimum tenuiflorum] (70) | | | | | |------------------------------ XP_011076502.1 [Sesamum indicum] (23) | | | | | | /----- 678457517 [Utricularia gibba] (48) | | | /-71-+ | | | | \----- 678311340 [Utricularia gibba] (94) | | |---------72--------+ | | | \---------- EPS68093.1 [Genlisea aurea] (89) | | | | | \------------------------------ cra_locus_58430_iso_1 [Catharanthus roseus] (56) | | | | /----- cra_locus_11812_iso_1 [Catharanthus roseus] (10) | |------------------------87------------------------+ | | \----- Cc02_g03670 [Coffea canephora] (35) | | | | /----- XP_009624565.1 [Nicotiana tomentosiformis] (15) | | /---100---+ | | | \----- XP_016443891.1 [Nicotiana tabacum] (93) | | | | | /---100---+ /---------- Niben101Scf02955g02004.1 [Nicotiana benthamiana] (34) | | | | | | | | \-73-+ /----- XP_016489167.1 [Nicotiana tabacum] (62) | | | \-100+ | | | \----- XP_009801441.1 [Nicotiana sylvestris] (90) | | | | | | /----- Sopim03g006910.0.1 [Solanum pimpinellifolium] (22) | | /-100+ /-100+ | | | | | \----- Solyc03g006910.2.1 [Solanum lycopersicum] (25) | | | | /-100+ | | | | | \---------- Sopen03g002910.1 [Solanum pennellii] (98) | | | | /-100+ | | | | | \--------------- PGSC0003DMP400013372 [Solanum tuberosum] (170) --99-+ | | \-100+ | | | | /----- CA00g56330 [Capsicum annuum] (43) | | | \------68------+ | | | \----- Sme2.5_09905.1_g00002.1 [Solanum melongena] (47) | | /--95-+ | | | | /----- Niben101Scf02420g07005.1 [Nicotiana benthamiana] (26) | | | | /-95-+ | | | | | \----- XP_009788923.1 [Nicotiana sylvestris] (81) | | | | /-92-+ | | | | | | /----- XP_016481890.1 [Nicotiana tabacum] (54) | | | | | \-100+ | | | | /-99-+ \----- XP_009587651.1 [Nicotiana tomentosiformis] (75) | \---------69--------+ | | | | | | | \--------------- PGSC0003DMP400048605 [Solanum tuberosum] (61) | | \---100---+ | | | /----- Peaxi162Scf01178g00119.1 [Petunia axillaris] (80) | | \------100-----+ | | \----- Peinf101Scf00371g03016.1 [Petunia inflata] (95) | | | | /----- Itr_sc003191.1_g00003.1 [Ipomoea trifida] (44) | \--------------88--------------+ | \----- Itr_sc000090.1_g00019.1 [Ipomoea trifida] (87) | | /---------- Niben101Scf19439g00001.1 [Nicotiana benthamiana] (3) | | | | /----- XP_016462319.1 [Nicotiana tabacum] (6) | |-100+ | /---100---+ \----- XP_009620738.1 [Nicotiana tomentosiformis] (68) | | | | | | /----- XP_009757518.1 [Nicotiana sylvestris] (39) | | \-100+ | /-58-+ \----- XP_016511682.1 [Nicotiana tabacum] (58) | | | | | | /--------------- CA03g08260 [Capsicum annuum] (11) | | | | | | \-100+ /---------- Sopen09g029650.1 [Solanum pennellii] (92) | | | | | /-100+ \-100+ /----- Solyc09g074810.2.1 [Solanum lycopersicum] (96) | | | \-100+ | | | \----- Sopim09g074810.0.1 [Solanum pimpinellifolium] (160) | | | \--------------100-------------+ | /----- Peinf101Scf01201g04021.1 [Petunia inflata] (63) | \--------100--------+ | \----- Peaxi162Scf00156g00213.1 [Petunia axillaris] (72) | \------------------------------ Itr_sc000042.1_g00004.1 [Ipomoea trifida] (45) Root part of tree: /------------------------------------------------------------------ Peinf101Scf01201g04022.1 [Petunia inflata] (1) | |------------------------------------------------------------------ Peaxi162Scf00156g00023.1 [Petunia axillaris] (38) | | /-------------------------------------------- (192) | | | | /----------- Sopen04g025470.1 [Solanum pennellii] (12) + | /----100---+ | /----97----+ | \----------- PGSC0003DMP400018618 [Solanum tuberosum] (49) | | | /----96----+ | | | | \---------------------- Sme2.5_02737.1_g00005.1 [Solanum melongena] (29) | | \----100---+ | | \--------------------------------- CA06g04950 [Capsicum annuum] (73) | | \----100---+ /----------- XP_009597785.1 [Nicotiana tomentosiformis] (7) | /---------------100--------------+ | | \----------- XP_016462318.1 [Nicotiana tabacum] (82) | | | | /---------------------- Niben101Scf08573g00005.1 [Nicotiana benthamiana] (52) \----100---+ | | /----100---+ /----------- XP_016437313.1 [Nicotiana tabacum] (55) | | \----100---+ \----98----+ \----------- XP_009801280.1 [Nicotiana sylvestris] (79) | \--------------------------------- Niben101Scf06850g00011.1 [Nicotiana benthamiana] (78) |