PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Peaxi162Scf00156g00213.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
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Family | bHLH | ||||||||
Protein Properties | Length: 251aa MW: 28690.4 Da PI: 8.4829 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.1 | 4.8e-11 | 78 | 130 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ h +Er RR+++ + +Lr++lP + ++K s ++ ++Av+YI++Lq Peaxi162Scf00156g00213.1 78 KKVVHRNVERHRRQEMANLHTKLRSILPLEF--IKGKRSASDHMQEAVNYIRHLQ 130 6788*************************65..*********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 4.07E-8 | 75 | 134 | No hit | No description |
SuperFamily | SSF47459 | 1.31E-11 | 75 | 143 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 12.633 | 77 | 129 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.9E-8 | 78 | 130 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.6E-10 | 78 | 146 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MDNYLWEIFS TSKQIIEDHV DQQLQIPFQI NGFCQQDQIH HQDLKGGPHE TSSVNRNNTK 60 KELRRRARST SDDSNKMKKV VHRNVERHRR QEMANLHTKL RSILPLEFIK GKRSASDHMQ 120 EAVNYIRHLQ KNIEGLDNTR EKIKNSSNFG AENGSTTSAS YVHKYAVTVN PCQDGMEILI 180 VNSCKEEMVP LSKVLGELLQ EGLNVVSCVY SKQDEWTLIR IQCQVSDISS VSADGLQKKL 240 SDAVNKTSIK E |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 62 | 68 | LRRRARS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019245688.1 | 1e-114 | PREDICTED: transcription factor bHLH120-like | ||||
TrEMBL | A0A1J6IG60 | 1e-112 | A0A1J6IG60_NICAT; Transcription factor bhlh120 | ||||
STRING | XP_009757518.1 | 1e-107 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA598 | 24 | 109 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 2e-30 | bHLH family protein |