PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009587651.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bHLH | ||||||||
Protein Properties | Length: 253aa MW: 28678.8 Da PI: 9.2774 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.4 | 3e-14 | 77 | 129 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++++h +Er+RR+++ + ++ Lr+llP + ++K s ++ +Av+YIk+Lq XP_009587651.1 77 KKVMHRDMERQRRQEMTNLYSSLRSLLPLqC---VKGKRSVSDHMHEAVNYIKQLQ 129 6899*************************88...9********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.76E-9 | 75 | 130 | No hit | No description |
PROSITE profile | PS50888 | 13.516 | 76 | 128 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.4E-11 | 77 | 129 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.14E-13 | 77 | 143 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.1E-11 | 78 | 144 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 0.0032 | 82 | 134 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence Send to blast |
MFPLQQSDDN ELVFQILSNP SQQGNISQDL ILDYASLETS HPQNVKNPKK KKLPRRVLGS 60 RSNSDKKDSI TDEFKLKKVM HRDMERQRRQ EMTNLYSSLR SLLPLQCVKG KRSVSDHMHE 120 AVNYIKQLQA NMNKLERKRE KLKMVPKSSP RGRVEEDSSD VSSIIASPDC VTVSPCHGGV 180 EILINGNNNR GESLPLSRIL QELLKEGLDV VSCVSAKVNQ NSLHRIQSEG CDEKCINLHS 240 LQRKVIDVIN IDV |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009587651.1 | 0.0 | PREDICTED: transcription factor bHLH36-like | ||||
TrEMBL | A0A1S4AYZ3 | 0.0 | A0A1S4AYZ3_TOBAC; transcription factor bHLH118-like | ||||
STRING | XP_009587651.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA598 | 24 | 109 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25410.1 | 3e-37 | bHLH family protein |