PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for
Brassica napus
M-type_MADS FamilyPhylogenetic tree for domain ? help Back to Top |
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Subtree rooted at node 260: /----- GSBRNA2T00107626001/23-69 (2) /-60-+ | \----- GSBRNA2T00153974001/25-71 (70) /----75---+ | | /----- GSBRNA2T00101318001/23-68 (11) | \-100+ | \----- GSBRNA2T00005560001/23-68 (62) | | /----- GSBRNA2T00080958001/16-64 (7) | /-66-+ | | \----- GSBRNA2T00062655001/17-65 (76) /----99---+ | | | |---------- GSBRNA2T00080532001/18-66 (12) | | | | | |---------- GSBRNA2T00046841001/18-66 (46) | | /-98-+ | | | |---------- GSBRNA2T00062664001/9-57 (73) | | | | | | | |---------- GSBRNA2T00080526001/17-64 (117) | \-95-+ | | | \---------- GSBRNA2T00046305001/18-66 (141) | | | | /----- GSBRNA2T00064764001/6-55 (51) | \---100---+ | \----- GSBRNA2T00055802001/6-55 (65) | | /----- GSBRNA2T00156465001/29-69 (5) | /-100+ /--99-+ | \----- GSBRNA2T00108890001/31-72 (67) | | /-66-+ | | | \---------- GSBRNA2T00108894001/2-37 (138) | | /-100+ | | | | /----- GSBRNA2T00156464001/32-70 (94) | | | \----77---+ | | | \----- GSBRNA2T00069341001/26-66 (150) | | | | | | /----- GSBRNA2T00071428001/137-178 (18) | | /-100+ | | | | | |----- GSBRNA2T00156370001/24-70 (31) | | | | | | | | | /-56-+----- GSBRNA2T00038753001/23-64 (63) | | | | | | | | | | | |----- GSBRNA2T00156405001/22-68 (190) | | | \----94---+ | | \-56-+ | \----- GSBRNA2T00037849001/24-56 (145) /----93---+ | | | | | \---------- GSBRNA2T00037853001/20-54 (68) | | | | | | /----- GSBRNA2T00019704001/22-56 (23) | | | /-61-+ | | | | \----- GSBRNA2T00041524001/22-60 (118) | | \------100-----+ | | \---------- GSBRNA2T00067587001/161-189 (82) | | | | /----- GSBRNA2T00107040001/11-50 (6) | | /-99-+ | | | \----- GSBRNA2T00136207001/11-60 (119) | | /-89-+ | | | \---------- GSBRNA2T00042622001/12-60 (41) | | /-100+ | | | \--------------- GSBRNA2T00042625001/10-59 (77) | \-------99------+ | | /----- GSBRNA2T00078618001/10-58 (113) | \------100-----+ | \----- GSBRNA2T00119723001/10-58 (130) | | /----- GSBRNA2T00147713001/10-55 (9) | /-100+ | | \----- GSBRNA2T00133705001/10-54 (93) | /---------98--------+ | | | /----- GSBRNA2T00028815001/10-50 (89) | | \-98-+ | | \----- GSBRNA2T00120482001/10-50 (136) | | | | /-------------------- GSBRNA2T00054797001/10-50 (10) | | | | | | /----- GSBRNA2T00120014001/10-50 (25) | | |------100-----+ | | | \----- GSBRNA2T00038534001/10-50 (91) /-98-+ | | | | | | /----- GSBRNA2T00005999001/11-52 (36) | | | | /-97-+ | | | /-51-+ | \----- GSBRNA2T00043985001/11-51 (74) | | | | | /-100+ | | | | | | \---------- GSBRNA2T00066453001/11-49 (110) | | | | |-81-+ | | | | | \--------------- GSBRNA2T00038536001/11-50 (61) | | | | | | | | | |-------------------- GSBRNA2T00029566001/10-51 (39) | | /--91-+ | | | | | |-52-+ \-------------------- GSBRNA2T00104403001/10-50 (122) | | | | | | | | | | /---------- GSBRNA2T00033125001/11-50 (48) | | | | | | | | | | | /-100+ /----- GSBRNA2T00015742001/11-50 (127) | | | | | | \-100+ | | | | | | \----- GSBRNA2T00119499001/11-50 (149) | | | | \----95---+ | | | | | /----- GSBRNA2T00133701001/11-48 (114) | | | | \---100---+ | | | | \----- GSBRNA2T00147709001/11-50 (129) | | | | | | | | /----- GSBRNA2T00022341001/10-52 (26) | | /-64-+ | /-57-+ | | | | | | \----- GSBRNA2T00058691001/21-58 (133) | | | | | /-100+ | | | | | | | /----- GSBRNA2T00017238001/11-57 (54) | | | | | | \-100+ | | | | | | \----- GSBRNA2T00007507001/19-65 (59) | | | | \------100-----+ | | | | | /---------- GSBRNA2T00120454001/1-25 (71) | | | | | | | | | | \-89-+ /----- GSBRNA2T00120455001/11-53 (96) | \-58-+ | \-100+ | | | \----- GSBRNA2T00120181001/10-56 (125) | | | | | | /----- GSBRNA2T00111100001/10-50 (37) | | \--------------100-------------+ | | \----- GSBRNA2T00000265001/9-50 (112) | | | | /----- GSBRNA2T00013557001/16-58 (49) | | /-100+ | | | \----- GSBRNA2T00133354001/16-58 (130) | \--------------100-------------+ | | /----- GSBRNA2T00060837001/10-51 (88) | \-94-+ | \----- GSBRNA2T00062587001/10-51 (140) | | /----- GSBRNA2T00066948001/14-53 (3) | | | |----- GSBRNA2T00127904001/14-53 (8) | | | /-----------98-----------+----- GSBRNA2T00091115001/14-53 (69) | | | | | |----- GSBRNA2T00091140001/14-53 (92) | | | | | \----- GSBRNA2T00052939001/14-53 (128) | | | | /----- GSBRNA2T00156356001/13-51 (15) | | | | /--91-+ |----- GSBRNA2T00096909001/13-51 (28) | | | /---------59--------+ | | | | |----- GSBRNA2T00093550001/13-52 (140) | | | | | | | | | \----- GSBRNA2T00039065001/13-51 (115) | | | | | | | | /----- GSBRNA2T00111307001/3-41 (60) | | | | /-100+ | | \-89-+ | \----- GSBRNA2T00070348001/14-50 (148) | | | | | | | /-61-+---------- GSBRNA2T00144356001/19-55 (170) | | | | | | | | /-53-+ \---------- GSBRNA2T00143104001/21-55 (144) | | | | | | | \-100+ \--------------- GSBRNA2T00144321001/22-56 (142) | /-100+ | | | | \-------------------- GSBRNA2T00143077001/16-53 (79) | | | | | | /----- GSBRNA2T00136331001/12-50 (34) | | | /-95-+ | | | | \----- GSBRNA2T00080930001/12-50 (83) | | |------------78-----------+ | | | | /----- GSBRNA2T00028881001/16-55 (43) | | | \-100+ | | | \----- GSBRNA2T00097034001/16-56 (80) | | | | /-63-+ | /----- GSBRNA2T00070528001/26-63 (35) | | | | /-100+ | | | | | \----- GSBRNA2T00069732001/26-64 (147) | | | \------------52-----------+ | | | \---------- GSBRNA2T00014621001/12-49 (81) | | | | | | /----- GSBRNA2T00136760001/51-99 (44) | | | /---100---+ | | | | \----- GSBRNA2T00016259001/51-99 (84) /-56-+ | | | | | | \-----------100-----------+ /---------- GSBRNA2T00103329001/35-83 (66) | | | | | | | | \-70-+ /----- GSBRNA2T00099551001/50-98 (86) | | | \-98-+ | | | \----- GSBRNA2T00097199001/50-98 (99) | | | | | | /----- GSBRNA2T00015062001/14-61 (4) | | | | | | | |----- GSBRNA2T00001444001/14-61 (56) | | | /-72-+ | | | | |----- GSBRNA2T00001450001/14-61 (120) | | | | | | | | /-100+ \----- GSBRNA2T00040524001/14-61 (131) | | | | | | | | /----97---+ \---------- GSBRNA2T00088161001/14-61 (146) | | | | | | | | | \--------------- GSBRNA2T00001451001/18-62 (139) | | | | | | | | /----- GSBRNA2T00047863001/16-62 (13) | | |---------53---------+ /------100-----+ | | | | | \----- GSBRNA2T00034591001/16-62 (111) | | | | | | | | | | /---------- GSBRNA2T00101166001/17-62 (16) | | | | | | | |-80-+ \-99-+ | /----- GSBRNA2T00026989001/17-62 (52) | | | | /-88-+-76-+ | | | | | | \----- GSBRNA2T00083353001/16-62 (72) | | | | | | | | | | | \---------- GSBRNA2T00074410001/16-62 (120) | | | \-99-+ | | | | /----- GSBRNA2T00118767001/16-62 (24) | | | | /-100+ | | | | | \----- GSBRNA2T00090015001/2-47 (87) | | | \-99-+ | | | \---------- GSBRNA2T00050349001/17-62 (134) | | | | | | /----- GSBRNA2T00028070001/2-51 (29) | | | /-100+ | | | | \----- GSBRNA2T00134672001/13-62 (50) | | | /-62-+ | | | | | /----- GSBRNA2T00075636001/19-62 (180) | | | | \-100+ | | | /-100+ \----- GSBRNA2T00097714001/18-62 (110) | | | | | | | | | | /----- GSBRNA2T00015324001/2-51 (38) | | | | \---100---+ | | | /-100+ \----- GSBRNA2T00013704001/13-62 (40) | | | | | /-72-+ | | | | /----- GSBRNA2T00108592001/20-63 (98) | | | | | \------100-----+ | | | |---------55---------+ \----- GSBRNA2T00035003001/20-63 (137) | | | | | | | | | | /----- GSBRNA2T00022419001/11-57 (95) | | | | \--------100--------+ | | | | \----- GSBRNA2T00111848001/11-57 (150) | | | | | | | | /---------- GSBRNA2T00060000001/19-62 (33) | | | | | | | | \-----------------93----------------+ /----- GSBRNA2T00136639001/3-46 (42) | | | \-95-+ | | | \----- GSBRNA2T00017641001/3-46 (116) | | | | | | /----- GSBRNA2T00052639001/9-59 (14) | | | /-76-+ | | | | \----- GSBRNA2T00110225001/9-59 (22) | | | /-100+ | | | | | /----- GSBRNA2T00093623001/9-59 (121) | | | | \-100+ | | |-----------------69----------------+ \----- GSBRNA2T00154523001/9-59 (126) | | | | | | | | /----- GSBRNA2T00132707001/24-74 (27) | | | \---100---+ | | | \----- GSBRNA2T00028329001/24-74 (75) | | | | | | /---------- GSBRNA2T00059736001/69-103 (17) | | | | | | |-------------------100------------------+ /----- GSBRNA2T00118568001/9-57 (30) | | | \-51-+ | | | \----- GSBRNA2T00007474001/9-57 (32) --91-+ | | | | | /----- GSBRNA2T00072693001/9-59 (47) | | |---------------------100---------------------+ | | | \----- GSBRNA2T00048692001/9-59 (53) | | | | | | /----- GSBRNA2T00117394001/9-53 (55) | | |----------------------60---------------------+ | | | \----- GSBRNA2T00029966001/9-58 (57) | | | | | | /----- GSBRNA2T00059241001/10-58 (58) | | | | | | |---------------------100---------------------+----- GSBRNA2T00142938001/10-58 (90) | | | | | | | \----- GSBRNA2T00009799001/10-58 (123) | | | | | \--------------------------------------------------- GSBRNA2T00079250001/9-56 (160) | | | \-------------------------------------------------------- GSBRNA2T00131136001/11-57 (132) | | /---------- GSBRNA2T00127197001/11-53 (19) | | | |---------- GSBRNA2T00127201001/10-53 (85) | | | /-53-+---------- GSBRNA2T00049567001/11-53 (97) | | | | | | /----- GSBRNA2T00127202001/11-53 (143) |---------------------100---------------------+ \-89-+ | | \----- GSBRNA2T00027140001/11-53 (151) | | | \--------------- GSBRNA2T00127199001/10-53 (124) | \------------------------------------------------------------- GSBRNA2T00147933001/9-59 (64) Root part of tree: /------------------------------------------------------------------ GSBRNA2T00139571001/9-53 (1) | |------------------------------------------------------------------ GSBRNA2T00102917001/9-53 (45) | |------------------------------------------------------------------ GSBRNA2T00025435001/9-53 (78) + |------------------------------------------------------------------ GSBRNA2T00035638001/9-53 (135) | | /------------------------------------------------- (260) | | \-------90-------+ /--------------------------------- GSBRNA2T00030112001/10-53 (20) | | \------100------+ /---------------- GSBRNA2T00081607001/10-53 (21) \-------93-------+ \---------------- GSBRNA2T00115333001/10-53 (100) |
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 256: /----- GSBRNA2T00080930001 (3) /---100---+ | \----- GSBRNA2T00136331001 (143) | /------71------+ /---------- GSBRNA2T00014621001 (66) | | | | \-100+ /----- GSBRNA2T00069732001 (118) | \-100+ | \----- GSBRNA2T00070528001 (137) | | /--------------- GSBRNA2T00143077001 (4) | | | | /----- GSBRNA2T00143104001 (19) | /-100+ /-100+ | | | | \----- GSBRNA2T00144321001 (190) /--95-+ | \-98-+ | | /-55-+ \---------- GSBRNA2T00144356001 (82) | | | | | | | | /----- GSBRNA2T00111307001 (180) | | | \------100-----+ | | | \----- GSBRNA2T00070348001 (133) | | | | | | /----- GSBRNA2T00052939001 (52) | | | /-91-+ | | | | \----- GSBRNA2T00127904001 (53) | \-61-+ /-89-+ | | | | /----- GSBRNA2T00091115001 (65) | | | \-98-+ /---------89--------+ | /-100+ \----- GSBRNA2T00091140001 (127) | | | | | | | | | \--------------- GSBRNA2T00066948001 (94) | | | | | | | | /----- GSBRNA2T00156356001 (74) | | \-67-+ /-89-+ | | | | \----- GSBRNA2T00096909001 (116) | | | /-100+ | | | | \---------- GSBRNA2T00093550001 (96) | | \-100+ | | \--------------- GSBRNA2T00039065001 (81) | | | | /----- GSBRNA2T00028881001 (44) | \--------------100-------------+ | \----- GSBRNA2T00097034001 (89) | | /----- GSBRNA2T00015062001 (7) | /-100+ | | \----- GSBRNA2T00088161001 (15) | /-63-+ | | \---------- GSBRNA2T00001450001 (36) | /-100+ | | \--------------- GSBRNA2T00040524001 (120) | /-100+ | | \-------------------- GSBRNA2T00001444001 (87) | /-100+ | | \------------------------- GSBRNA2T00001451001 (50) | /--95-+ | | | /----- GSBRNA2T00047863001 (79) | | \-----------100----------+ /-64-+ | \----- GSBRNA2T00034591001 (86) | | /-55-+ | | | | /----- GSBRNA2T00074410001 (21) | | | | /-100+ | | | | | \----- GSBRNA2T00101166001 (34) | | | \-----------100-----------+ | | | | /----- GSBRNA2T00083353001 (61) | | /-97-+ \-100+ | | | | \----- GSBRNA2T00026989001 (63) | | | | | | | | /---------- GSBRNA2T00050349001 (28) | | | | | | | | \--------------100-------------+ /----- GSBRNA2T00118767001 (40) | | /-95-+ \-100+ | | | | \----- GSBRNA2T00090015001 (67) | | | | | | | | /---------- GSBRNA2T00060000001 (10) | | | | | | | | \----------------100----------------+ /----- GSBRNA2T00136639001 (130) | | | \-100+ | | | \----- GSBRNA2T00017641001 (148) | | | | | | /----- GSBRNA2T00108592001 (30) | | | /------100-----+ | | | | \----- GSBRNA2T00035003001 (72) | | | | | | | | /----- GSBRNA2T00028070001 (31) | | | | /-100+ | | |--------------84--------------+ | \----- GSBRNA2T00134672001 (132) | | | | /-63-+ | \-59-+ | | | /----- GSBRNA2T00015324001 (91) | | | | \-100+ | | \-96-+ \----- GSBRNA2T00013704001 (141) | | | | | | /----- GSBRNA2T00097714001 (64) | | \---100---+ | | \----- GSBRNA2T00075636001 (71) | | | | /----- GSBRNA2T00099551001 (70) | | /-100+ | | | \----- GSBRNA2T00097199001 (134) | | /-100+ | | | \---------- GSBRNA2T00103329001 (147) --62-+ | /-83-+ | | | | /----- GSBRNA2T00136760001 (97) | | | \---100---+ | \--------------55--------------+ \----- GSBRNA2T00016259001 (126) | | | | /----- GSBRNA2T00111848001 (92) | \------100-----+ | \----- GSBRNA2T00022419001 (110) | | /----- GSBRNA2T00052639001 (5) | /-95-+ | | \----- GSBRNA2T00110225001 (122) | /--------100--------+ | | | /----- GSBRNA2T00093623001 (78) | | \-68-+ | | \----- GSBRNA2T00154523001 (130) | | | | /--------------- GSBRNA2T00027140001 (6) | | | | | | /---------- GSBRNA2T00049567001 (8) | | | | | | /-61-+-50-+ /----- GSBRNA2T00127197001 (48) | | | | \-63-+ | | | | \----- GSBRNA2T00127201001 (77) | | /-100+ | | | | | \--------------- GSBRNA2T00127202001 (83) | | | | | | | \-------------------- GSBRNA2T00127199001 (24) | | | | | | /--------------- GSBRNA2T00035638001 (11) | |-80-+ | | | | | /----- GSBRNA2T00102917001 (25) | | | /-97-+ /-100+ | | | | | | \----- GSBRNA2T00139571001 (41) | | | | \-53-+ | | | | \---------- GSBRNA2T00025435001 (54) | | \-100+ | | | /----- GSBRNA2T00081607001 (16) | | | /-91-+ | | | | \----- GSBRNA2T00115333001 (120) | | \----89---+ | | \---------- GSBRNA2T00030112001 (68) \--------------57--------------+ | /----- GSBRNA2T00007474001 (12) | /-99-+ | | \----- GSBRNA2T00118568001 (39) |--------100--------+ | \---------- GSBRNA2T00059736001 (60) | | /----- GSBRNA2T00142938001 (14) | /-59-+ | | \----- GSBRNA2T00059241001 (26) |--------100--------+ | \---------- GSBRNA2T00009799001 (46) | | /----- GSBRNA2T00048692001 (35) |-----------100----------+ | \----- GSBRNA2T00072693001 (49) | | /----- GSBRNA2T00132707001 (37) |-----------100----------+ | \----- GSBRNA2T00028329001 (117) | |------------------------------ GSBRNA2T00117394001 (84) | |------------------------------ GSBRNA2T00079250001 (88) | |------------------------------ GSBRNA2T00029966001 (93) | |------------------------------ GSBRNA2T00131136001 (99) | \------------------------------ GSBRNA2T00147933001 (121) Root part of tree: /------------------------------------------------------------------ GSBRNA2T00108894001 (1) | | /---------- GSBRNA2T00029566001 (2) | | | /-100+ /----- GSBRNA2T00054797001 (27) | | \-100+ | | \----- GSBRNA2T00104403001 (128) | /-100+ | | | /----- GSBRNA2T00038534001 (98) | | \---100---+ | | \----- GSBRNA2T00120014001 (151) | | | /-94-+ /---------- GSBRNA2T00066453001 (29) | | | | | | | /-100+ /----- GSBRNA2T00043985001 (144) | | | | \-100+ | | \-100+ \----- GSBRNA2T00005999001 (145) | | | | /-92-+ \--------------- GSBRNA2T00038536001 (138) | | | | | | /----- GSBRNA2T00147713001 (33) | | | /-100+ | | | | \----- GSBRNA2T00133705001 (125) | | \------100-----+ | | | /----- GSBRNA2T00028815001 (43) | | \-100+ | | \----- GSBRNA2T00120482001 (90) | | | | /----- GSBRNA2T00120181001 (20) | /--89-+ /-100+ | | | | \----- GSBRNA2T00120455001 (80) | | | /---100---+ | | | | \---------- GSBRNA2T00120454001 (115) | | | | | | | | /---------- GSBRNA2T00058691001 (76) | | | /-100+ | | | | | | /-100+ /----- GSBRNA2T00017238001 (113) | | | | | | \-100+ | | | | \-100+ \----- GSBRNA2T00007507001 (146) | | \-99-+ | | | | \--------------- GSBRNA2T00022341001 (142) | | | | | | /----- GSBRNA2T00133701001 (140) | | \--------100--------+ | | \----- GSBRNA2T00147709001 (131) | | | | /----- GSBRNA2T00136207001 (9) | /-63-+ /-95-+ | | | | \----- GSBRNA2T00107040001 (149) | | | /-63-+ | | | | | /----- GSBRNA2T00042622001 (42) | | | | \-64-+ | | | /-93-+ \----- GSBRNA2T00042625001 (58) | | | | | | | | | | /----- GSBRNA2T00078618001 (110) | | | | \---100---+ | | |-------90------+ \----- GSBRNA2T00119723001 (111) | | | | | | | | /----- GSBRNA2T00111100001 (100) | | | \------100-----+ | /-87-+ | \----- GSBRNA2T00000265001 (123) | | | | | | | | /----- GSBRNA2T00015742001 (51) | | | | /-99-+ + | | | | \----- GSBRNA2T00119499001 (135) | | | \-----------100-----------+ | | | \---------- GSBRNA2T00033125001 (150) | | | | | |----------------------------------------- (256) | | | | | | /----- GSBRNA2T00060837001 (22) | | | /-100+ | | | | \----- GSBRNA2T00062587001 (136) | | \--------------91--------------+ | | | /----- GSBRNA2T00133354001 (139) | /-82-+ \-100+ | | | \----- GSBRNA2T00013557001 (150) | | | | | | /----- GSBRNA2T00005560001 (32) | | | /-99-+ | | | | \----- GSBRNA2T00101318001 (170) | | | /------------99-----------+ | | | | | /----- GSBRNA2T00153974001 (47) | | | | \-100+ | | | | \----- GSBRNA2T00107626001 (55) | | | | | | | | /---------- GSBRNA2T00080958001 (38) | | | | | | | | | /-99-+ /----- GSBRNA2T00046305001 (62) | | | | | \-99-+ | | \----83---+ /-57-+ \----- GSBRNA2T00080526001 (124) | /-99-+ | | | | | | | /-64-+ \--------------- GSBRNA2T00062655001 (160) | | | | | | | | | | | \-------------------- GSBRNA2T00062664001 (85) | | | | /-100+ | | | | | |------------------------- GSBRNA2T00046841001 (59) | | | | | | | | | \-100-+ \------------------------- GSBRNA2T00080532001 (129) | | | | | | | | /----- GSBRNA2T00055802001 (73) | | | \-----------100----------+ | | | \----- GSBRNA2T00064764001 (119) | | | | /-100+ | /----- GSBRNA2T00041524001 (45) | | | | /-60-+ | | | | | \----- GSBRNA2T00019704001 (140) | | | \-------------------80-------------------+ | | | \---------- GSBRNA2T00067587001 (57) | | | | | | /---------- GSBRNA2T00071428001 (17) | | | | | | | /-86-+ /----- GSBRNA2T00037849001 (56) | | | | \-89-+ |-100+ | | \----- GSBRNA2T00156370001 (75) | | | | | | \-------------------100------------------+ /----- GSBRNA2T00037853001 (23) | | | /-100+ | | | | \----- GSBRNA2T00038753001 (69) | | \-93-+ | | \---------- GSBRNA2T00156405001 (112) | | | | /----- GSBRNA2T00156465001 (95) | \--------------------------100--------------------------+ | \----- GSBRNA2T00108890001 (114) | | /----- GSBRNA2T00156464001 (13) \-----------------------------100----------------------------+ \----- GSBRNA2T00069341001 (18) |