PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP3258
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Subtree rooted at node 141: /------------------------------- Sobic.008G029000.2.p [Sorghum bicolor] (2) | | /----- Pahal.C00161.1 [Panicum hallii] (7) | /----99---+ | | \----- Pahal.C00004.1 [Panicum hallii] (77) | | /-97-+ /----100---+ /----- Pavir.8KG125600.1.p [Panicum virgatum] (25) | | | | /-100+ | | | | | \----- Pavir.8KG022800.1.p [Panicum virgatum] (30) | | | \-98-+ | | | | /----- Pavir.8NG002100.1.p [Panicum virgatum] (55) | | | \-100+ | \-100+ \----- Pavir.3NG000100.1.p [Panicum virgatum] (73) | | | | /--------------------- Do014386.1 [Dichanthelium oligosanthes] (9) | | | | | | /----- Seita.8G012600.1.p [Setaria italica] (13) | | | /-100+ /-95-+ \-62-+ | \----- Sevir.8G011300.1.p [Setaria viridis] (59) | | | /-76-+ | | | | | /----- Sevir.7G313400.1.p [Setaria viridis] (28) | | | | \-89-+ | | \-100-+ \----- Seita.7G302400.1.p [Setaria italica] (47) | | | | | \--------------- Seita.1G036000.1.p [Setaria italica] (76) | | | | /----- GRMZM2G169564_P01 [Zea mays] (29) | | /-98-+ | | | \----- Sobic.005G014000.1.p [Sorghum bicolor] (71) | \------------95-----------+ | \---------- Pavir.J748200.1.p [Panicum virgatum] (42) /-95-+ | | /----- Zjn_sc00031.1.g00410.1.am.mkhc [Zoysia japonica] (3) | | /-84-+ | | | \----- Zmw_sc03642.1.g00120.1 [Zoysia matrella] (56) | | /-99-+ | | | | /----- Zmw_sc03404.1.g00090.1 [Zoysia matrella] (21) | | | \-99-+ | | | \----- Zpz_sc01963.1.g00090.1.sm.mk [Zoysia pacifica] (46) | | /-100-+ | | | | /---------- Zmw_sc08548.1.g00020.1 [Zoysia matrella] (24) | | | | | /--98-+ | | | |---------- Zjn_sc00316.1.g00050.1.am.mk [Zoysia japonica] (43) | | | | \-100+ | | \--------100--------+ | /----- Zpz_sc01963.1.g00120.1.sm.mk [Zoysia pacifica] (61) | | | \-97-+ | | | \----- Zmw_sc03404.1.g00060.1 [Zoysia matrella] (75) | | | | | | /----- Zmw_sc00195.1.g00370.1 [Zoysia matrella] (31) | | \------100------+ | | \----- Zpz_sc00429.1.g00260.1.sm.mk [Zoysia pacifica] (39) | | | | /----- Seita.8G098800.1.p [Setaria italica] (22) | \-------------------100------------------+ | \----- Sevir.8G101600.1.p [Setaria viridis] (38) | | /----- KN541348.1_FGP002 [Oryza longistaminata] (4) | /-79-+ | | \----- OMERI11G01570.1 [Oryza meridionalis] (8) | /-------69------+ | | | /----- OPUNC12G00990.1 [Oryza punctata] (20) | | \-100+ | | \----- OPUNC11G00980.1 [Oryza punctata] (65) | | | | /----- OBART11G01110.1 [Oryza barthii] (5) | | | | | /-------96------+----- ORGLA11G0202000.1 [Oryza glaberrima] (33) | | | | /-98-+ | | \----- OGLUM11G00870.1 [Oryza glumaepatula] (44) | | | | | | |-100+ /---------- ORUFI11G01050.1 [Oryza rufipogon] (19) | | | | | | | | | /-92-+ /----- ONIVA11G01240.1 [Oryza nivara] (26) | | /-56-+ | | \-89-+ | | | | \--97-+ \----- BGIOSGA034612-PA [Oryza sativa indica] (70) | | | | | | | | | \--------------- LOC_Os11g02530.1 [Oryza sativa japonica] (34) | | | | | | | | /---------- LOC_Os12g02450.1 [Oryza sativa japonica] (6) | | | | | | | | | |---------- BGIOSGA036756-PA [Oryza sativa indica] (18) | | | | /-82-+ | | | | | | /----- ONIVA11G01070.1 [Oryza nivara] (23) | | | | | \-100+ | | | | | \----- ORUFI12G01180.1 [Oryza rufipogon] (50) | | /-99-+ | | | | | | \----99----+--------------- ORGLA12G0007600.1 [Oryza glaberrima] (32) | | | | | | | | | |--------------- OBART12G00850.1 [Oryza barthii] (35) | | | | | | | | | \--------------- OGLUM12G01420.1 [Oryza glumaepatula] (51) | | | | | | | | /----- OB11G10760.1 [Oryza brachyantha] (11) | | | |-----------100-----------+ | \------100------+ | \----- OB12G11030.1 [Oryza brachyantha] (53) | | | | | | /----- LPERR12G01080.1 [Leersia perrieri] (14) | | \------------97-----------+ | | \----- LPERR11G00970.1 [Leersia perrieri] (37) /-100+ | | | | /----- Bradi4g44370.2.p [Brachypodium distachyon] (12) | | | /-100+ | | | | \----- Brast05G291500.1.p [Brachypodium stacei] (79) | | \------------99-----------+ | | | /----- TRIUR3_26571-P1 [Triticum urartu] (48) | | \-100+ | | \----- EMT18619 [Aegilops tauschii] (64) | | | | /---------- ONIVA05G08650.1 [Oryza nivara] (10) | | | | | /-99-+ /----- ORUFI05G08750.1 [Oryza rufipogon] (15) | | | | | | | | \-100+----- LOC_Os05g14370.1 [Oryza sativa japonica] (41) | | | | | | | \----- BGIOSGA017556-PA [Oryza sativa indica] (78) | | | | | /-100-+--------------- KN539730.1_FGP007 [Oryza longistaminata] (16) | | | | | | | |--------------- OGLUM05G08540.1 [Oryza glumaepatula] (58) | | | | | | /-100+ |--------------- ORGLA05G0070000.1 [Oryza glaberrima] (60) | | | | | --100+ | | | \--------------- OBART05G08130.1 [Oryza barthii] (66) | | /-91-+ | | | | | \--------------------- OPUNC05G07410.1 [Oryza punctata] (54) | | | | | | /-100+ \-------------------------- OB05G17240.1 [Oryza brachyantha] (52) | | | | | | | \------------------------------- LPERR05G06630.1 [Leersia perrieri] (62) | | | | \---------100--------+ /----- Sevir.3G084500.1.p [Setaria viridis] (17) | | /-100+ | | | \----- Seita.3G082600.1.p [Setaria italica] (27) | \-----------100-----------+ | | /----- Pavir.3KG079100.1.p [Panicum virgatum] (72) | \-100+ | \----- Pahal.C00854.1 [Panicum hallii] (74) | | /----- EMT18620 [Aegilops tauschii] (40) | /-100+ | | \----- Traes_5AL_69A969FF4.1 [Triticum aestivum] (49) | /-60-+ | | \---------- Brast05G291300.1.p [Brachypodium stacei] (69) | | \----------------------100---------------------+ /---------- TRIUR3_01447-P1 [Triticum urartu] (45) | | \-100+ /----- EMT19399 [Aegilops tauschii] (63) \-100+ \----- EMT21015 [Aegilops tauschii] (67) Root part of tree: /------------------------------------------------------------------- PDK_30s65509418g001 [Phoenix dactylifera] (1) | |------------------------------------------------------------------- XP_010922758.1 [Elaeis guineensis] (68) + | /--------------------------------------------- (141) | | \---------100---------+ /---------------------- GSMUA_Achr6P25120_001 [Musa acuminata] (36) \----------100---------+ \---------------------- GSMUA_Achr5P08580_001 [Musa acuminata] (57) |