PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03642.1.g00120.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 266aa    MW: 29506.7 Da    PI: 5.5586
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03642.1.g00120.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY26.81e-081241751759
                                   T-SS-EEEEEE-ST...T---EEEEEE-SSSTT......EEEEEEES--SS- CS
                          WRKY  17 gsefprsYYrCtsa...gCpvkkkversaedpk......vveitYegeHnhe 59 
                                   + +  rsYYrCt++   gC+++k v++++e +       + +++Y+g+H+++
  Zmw_sc03642.1.g00120.1.sm.mk 124 KHNSRRSYYRCTYKqeqGCKATKTVQQQDEGTGadhaavMYTVVYHGQHTCK 175
                                   56778********98999********99854322222227799*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007747.1E-8120176IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.7E-10120176IPR003657WRKY domain
PfamPF031066.2E-12121175IPR003657WRKY domain
SuperFamilySSF1182907.06E-9121176IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MKRHHHPNNN SKMSLISGQP PACYSPSRTV CDHGSAMKEI AKEQSLVTQL RAIVLPALQA  60
DERSELVAQM FQDVLDCSSK AMAELQLLHD KSDDDALLVD DKKRVRRINP NEVDKEDVIK  120
PHQKHNSRRS YYRCTYKQEQ GCKATKTVQQ QDEGTGADHA AVMYTVVYHG QHTCKQGNSC  180
SDSGADGFET KIAVPSGSDD SRSSISQNCL ECPCDQQSSR DGSNKLINGS ADFNAENNMY  240
EAFDMTASAF LELDSWDLDA LLRSDA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025805419.15e-74probable WRKY transcription factor 62
TrEMBLK3ZN094e-74K3ZN09_SETIT; Uncharacterized protein
STRINGPavir.Cb02194.1.p3e-75(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32583079