PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT18620 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | WRKY | ||||||||
Protein Properties | Length: 315aa MW: 35046.9 Da PI: 5.2623 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 56.6 | 5.2e-18 | 183 | 228 | 3 | 46 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTT CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpk 46 Dg++WrKYGqK+++g +++rsYYrCt++ +C+++k v+++++d+ EMT18620 183 DGHQWRKYGQKNINGRQHARSYYRCTYTerNCSATKTVQQQDQDGG 228 9**************************999***********99975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.4E-20 | 171 | 255 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.24E-17 | 175 | 255 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.0E-23 | 181 | 256 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 16.627 | 183 | 243 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.0E-22 | 183 | 255 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence Send to blast |
MENPDAIDEI SVATEASATP RDSASYAEVA LSRACKQPDT LTSLENATAK HMDHSKNRDH 60 GLAEIEALLR REQELVTQLR ALILPQLHNV DSGSAELAVQ LFDDAIRCTT SVVSKLFTAG 120 SGATIELIDD KSLVRKNSTG TTATAIDDKM DEQAKPSCIV GRKRRRNDGK RSRSLVTNVP 180 HYDGHQWRKY GQKNINGRQH ARSYYRCTYT ERNCSATKTV QQQDQDGGSS IYSADAGEDQ 240 GAKYTVVYYG DHTCKASDNI SNNIIDHLPN LVDIDLRRGD TERVTLEIPE FEMELDVPAL 300 LEVFNNSQLN WEIVC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 161 | 165 | RKRRR |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU669661 | 0.0 | EU669661.1 Triticum aestivum WRKY31 gene, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004980128.1 | 6e-94 | probable WRKY transcription factor 26 | ||||
TrEMBL | N1R439 | 0.0 | N1R439_AEGTA; WRKY transcription factor 55 | ||||
STRING | EMT18620 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3258 | 30 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66550.2 | 1e-13 | WRKY DNA-binding protein 67 |