PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC12G00990.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 322aa    MW: 36001.9 Da    PI: 6.1491
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC12G00990.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY55.21.4e-17149203356
                      -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES-- CS
             WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeH 56 
                      Dg++WrKYGqK+++++++prsYYrCt++   +C+++k v++ + d +     Y+g+H
  OPUNC12G00990.1 149 DGHQWRKYGQKHINNAKHPRSYYRCTYRqeeKCKATKTVQQRE-DLHNA-NSYNGDH 203
                      9**************************99999*******9987.33222.2333333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.3E-21142217IPR003657WRKY domain
SuperFamilySSF1182909.02E-18143217IPR003657WRKY domain
SMARTSM007741.6E-29147219IPR003657WRKY domain
PfamPF031061.7E-22149217IPR003657WRKY domain
PROSITE profilePS5081114.309149189IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MKNSSNKRSL VADQYHPLSV CCDHRAALRE IAMGQSLVTQ LRAIVLPALQ SDERCDLAAQ  60
MLEGILDCSR KAISELQLQL SSSASPHDDD DHVDDKRRVR KIISSSSDED DHHCSRKAAD  120
DNGNKPLRQH KRRRFGDSVS LETPVPHYDG HQWRKYGQKH INNAKHPRSY YRCTYRQEEK  180
CKATKTVQQR EDLHNANSYN GDHPIMYTVV YYGQHTCCKG PASDDDHVVV EASQVSTESH  240
CQSPGSSSSD LQAAAHVGDS TQCSNISANC SSSVVVEDCN KLLDMLPAAD DLTTDVLLFD  300
MTAYAPLDLD INWDMDTNAL WV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-131492171068OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ2981830.0DQ298183.1 Oryza sativa WRKY transcription factor 64 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015620021.10.0probable WRKY transcription factor 70
TrEMBLA0A0E0MIY00.0A0A0E0MIY0_ORYPU; Uncharacterized protein
STRINGOPUNC12G00990.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32583079
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.15e-18WRKY DNA-binding protein 70