PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIUR3_01447-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 238aa MW: 26604.4 Da PI: 5.5535 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 55.8 | 9e-18 | 117 | 183 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTE........EEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkv........veitYegeHnhe 59 Dg++WrKYGqK+++g e++rsYYrC+++ +C+++k ++++++++++ +++Y g+H+++ TRIUR3_01447-P1 117 DGHHWRKYGQKNINGRENARSYYRCAYTerNCSATKTIQQQDQNGSLnceeeaakYNVVYYGHHTCS 183 9************************99888**********998876522222222679999999986 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.0E-20 | 101 | 183 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.19E-18 | 109 | 183 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.0E-23 | 115 | 184 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.4E-21 | 117 | 182 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 15.066 | 117 | 160 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 238 aa Download sequence Send to blast |
EMDALLTRQQ ELLAQLRALI LPALRDADGR SVDLAVSLFD DVIDCIAGVM SRLHGISTQA 60 DGHGPATAFD HTDVDVISPN AGEGQEEKPM ISNIGQKRRR NNDRRSRSLV TAVPHYDGHH 120 WRKYGQKNIN GRENARSYYR CAYTERNCSA TKTIQQQDQN GSLNCEEEAA KYNVVYYGHH 180 TCSNHSTING TMNDPGMDLS QNEKMAGSVK EFQKFDQGDL DVPALIEVLD NAELNWNI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020167912.1 | 1e-138 | probable WRKY transcription factor 70 | ||||
TrEMBL | T1LAC7 | 1e-179 | T1LAC7_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_01447-P1 | 1e-180 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3258 | 30 | 79 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G46400.1 | 4e-15 | WRKY DNA-binding protein 46 |