PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G169564_P01
Common NameWRKY9, ZEAMMB73_408098, Zm.32891
Organism
Zea mays
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family WRKY
Protein Properties Length: 345aa    MW: 38117.7 Da    PI: 6.4036
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G169564_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY51.71.8e-16166235358
                        -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTT...........EEEEEEES--SS CS
               WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpk...........vveitYegeHnh 58 
                        Dg +WrKYGqK++++++++rsYYrCt++   gC+++k v+++++d +           + +++Y g+H +
  GRMZM2G169564_P01 166 DGRQWRKYGQKHINNTKHSRSYYRCTYRqeqGCKATKTVQQQDDDSSnsssssgtaalMYTVVYYGQHSC 235
                        999************************98899*********99887523333333333456666677766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-21157237IPR003657WRKY domain
SuperFamilySSF1182902.75E-18160237IPR003657WRKY domain
SMARTSM007741.0E-28164237IPR003657WRKY domain
PfamPF031064.3E-22166235IPR003657WRKY domain
PROSITE profilePS5081114.998166211IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MKHQQSTRLL LPQAAAAPAD HPSPACCNRR SATEEIARGQ SLVTQLRAIV LPALQADQRA  60
ELVAHMFQSV LDCSSKAMAE LQLHHHHRRS PTPSARRPRD DDGDGLQVDD KKRVKRISSV  120
VGCKEEEEEG VAGAAAAANN PRRHQHKRRR LDDSAVSLET PVPHYDGRQW RKYGQKHINN  180
TKHSRSYYRC TYRQEQGCKA TKTVQQQDDD SSNSSSSSGT AALMYTVVYY GQHSCNSNKD  240
HNDDGGGANS SRPVDDDDSE TIKTRSSSDS QSSSSMSSIT CCADARGGGH QIIDQAFLPH  300
DSKPIVDDDE SAEEELDMRE PFDVAAFAPM DFDSWELDAL LRFGA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A8e-131662351068OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146150KRRRL
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO169272190.0
Expression AtlasGRMZM2G169564-
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G169564_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7284200.0KJ728420.1 Zea mays clone pUT6725 WRKY transcription factor (WRKY9) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021317456.11e-109probable WRKY transcription factor 62
TrEMBLK7UAL60.0K7UAL6_MAIZE; WRKY transcription factor (Fragment)
STRINGGRMZM2G169564_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32583079
Representative plantOGRP1147447
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-14WRKY DNA-binding protein 70