PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1228
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 159: /----- GSBRNA2T00141113001 [Brassica napus] (3) /-100+ | \----- XP_013623681.1 [Brassica oleracea] (22) /-100+ | | /----- XP_009132024.1 [Brassica rapa] (23) | \-97-+ /-100+ \----- GSBRNA2T00020997001 [Brassica napus] (78) | | | \--------------- RrC731_p2 [Raphanus raphanistrum] (93) | |-------------------- Tp6g20600 [Thellungiella parvula] (24) /-99-+ | | /----- Rsa1.0_01744.1_g00002.1 [Raphanus sativus] (48) | | /---100---+ | | | \----- RrC6527_p2 [Raphanus raphanistrum] (98) | | | | \-100+ /----- GSBRNA2T00133353001 [Brassica napus] (62) | | /-100+ /-100+ | | \----- XP_013606735.1 [Brassica oleracea] (81) | | \-100+ | | | /----- XP_009120398.1 [Brassica rapa] (66) | | \-59-+ | | \----- GSBRNA2T00013558001 [Brassica napus] (97) | | | \------------------------- Thhalv10014270m [Eutrema salsugineum] (25) | | /----- Csa18g032080.1 [Camelina sativa] (17) | /-51-+ /-100-+ | \----- Csa11g092630.1 [Camelina sativa] (18) | | | | | | /----- Cagra.0891s0087.1.p [Capsella grandiflora] (31) | | /-89-+-100+ | | | | \----- Carubv10026903m [Capsella rubella] (52) | | | | | | /-84-+ \---------- Csa02g064550.1 [Camelina sativa] (50) | | | | /-100+ | | \--------------- Bostr.26833s0356.1.p [Boechera stricta] (74) | | | | | | \---100---+ /----- 496013 [Arabidopsis lyrata] (53) | | | /-92-+ | | | | \----- Araha.2135s0003.1.p [Arabidopsis halleri] (80) /-100+ | \----87---+ | | | \---------- AT5G58900.1 [Arabidopsis thaliana] (89) | | | | | \------------------------------------ KFK27418.1 [Arabis alpina] (77) /-100+ | | | \----------------------------------------- AA4G00041 [Aethionema arabicum] (94) | | | | /----- XP_010535414.1 [Tarenaya hassleriana] (9) /-73-+ \-------------------100------------------+ | | \----- XP_010541440.1 [Tarenaya hassleriana] (56) | | | \--------------------------------------------------- evm.model.supercontig_112.58 [Carica papaya] (54) | | /----- Ciclev10028910m [Citrus clementina] (19) | /-100+ /-55-+ | \----- orange1.1g021816m [Citrus sinensis] (69) | | /---100---+ | | | | /----- Neem_25377_f_3 [Azadirachta indica] (41) | | | \-100+ | | | \----- Neem_5773_f_5 [Azadirachta indica] (51) | | | | | | /----- Gh_D05G0887 [Gossypium hirsutum] (28) | \-----------------99----------------+ /-96-+ --100+ | | \----- Gorai.009G093700.1 [Gossypium raimondii] (39) | | /-100+ | | | | /----- Cotton_A_12918_BGI-A2_v1.0 [Gossypium arboreum] (33) | | | \-100+ | \-100+ \----- Gh_A05G0757 [Gossypium hirsutum] (87) | | | \--------------- Thecc1EG041672t1 [Theobroma cacao] (75) | \------------------------------------------------------------- Eucgr.J01940.1.p [Eucalyptus grandis] (92) Root part of tree: /------------------------------------------------------------------ XP_010529770.1 [Tarenaya hassleriana] (1) | |------------------------------------------------------------------ XP_010553252.1 [Tarenaya hassleriana] (83) | | /------- Carubv10023736m [Capsella rubella] (2) | /-----100----+ | | \------- Cagra.0090s0025.1.p [Capsella grandiflora] (71) | | | | /------------- Csa05g015460.1 [Camelina sativa] (12) | | | | /------------97-----------+--100-+ /------- Csa06g040830.1 [Camelina sativa] (59) | | | \--55-+ | | | \------- Csa04g051770.1 [Camelina sativa] (72) | | | | | \-------------------- Bostr.23794s0264.1.p [Boechera stricta] (35) | | | | /------------- Rsa1.0_05868.1_g00002.1 [Raphanus sativus] (4) | | | | | /--100-+ /------- RrC2547_p1 [Raphanus raphanistrum] (44) | | | \--84-+ | | | \------- Rsa1.0_03192.1_g00003.1 [Raphanus sativus] (64) | | | | | /-----100----+ /------- XP_013633647.1 [Brassica oleracea] (27) | | | | /-100-+ | | | | | \------- GSBRNA2T00041005001 [Brassica napus] (45) | | | \--100-+ | | | | /------- XP_009143425.1 [Brassica rapa] (37) | | | \-100-+ | | | \------- GSBRNA2T00116915001 [Brassica napus] (60) | | | | | | /------- Tp4g20410 [Thellungiella parvula] (8) | | |------------72-----------+ | | | \------- Thhalv10017008m [Eutrema salsugineum] (30) | | | | | | /------- GSBRNA2T00155303001 [Brassica napus] (13) | | /--55--+ /-100-+ | | | | | \------- XP_013631946.1 [Brassica oleracea] (79) | | | | /--100-+ + /-----89-----+ | | | | /------- GSBRNA2T00005396001 [Brassica napus] (38) | | | | | | \-100-+ | | | | | /--57-+ \------- XP_009141719.1 [Brassica rapa] (46) | | | | | | | | | | | | | | /------- Rsa1.0_00328.1_g00009.1 [Raphanus sativus] (29) | | | | |--56--+ \-----77-----+ | | | | | | \------- RrC18072_p1 [Raphanus raphanistrum] (91) | | |--61-+ | | | | | | | \-------------------------- 676781480 [Sisymbrium irio] (68) | | | | | | | | | \--------------------------------- AA68G00014 [Aethionema arabicum] (47) | | | | | | | | /------- RrC2874_p5 [Raphanus raphanistrum] (7) | | | | /-----100----+ | | | | | \------- Rsa1.0_00574.1_g00004.1 [Raphanus sativus] (36) | | | | | | | | \--------100--------+ /------------- XP_009133230.1 [Brassica rapa] (20) | | | | | | | | | |------------- GSBRNA2T00124880001 [Brassica napus] (32) | | | \--100-+ | | | | /------- GSBRNA2T00079177001 [Brassica napus] (55) | | | \-100-+ | | | \------- XP_013622554.1 [Brassica oleracea] (90) | | | | | | /------- 482816 [Arabidopsis lyrata] (43) | | | | | | | /-100-+------- Araha.42201s0001.1.p [Arabidopsis halleri] (73) | | | | | | | \---------------100--------------+ \------- Araha.17955s0001.1.p [Arabidopsis halleri] (96) | | | | | \------------- AT2G38090.1 [Arabidopsis thaliana] (49) | | | | /-------------------- (159) | | | | | | /------- Neem_29_f_3 [Azadirachta indica] (14) | | /-100-+ /-100-+ | | | | | \------- Neem_23904_f_2 [Azadirachta indica] (15) \--100-+ | \--100-+ | | \------------- Ciclev10032309m [Citrus clementina] (70) | /--72--+ | | |-------------------------- evm.model.supercontig_1130.1 [Carica papaya] (11) | | | | | \-------------------------- Eucgr.B02800.1.p [Eucalyptus grandis] (16) | /-----99-----+ | | | /------- Ciclev10012285m [Citrus clementina] (26) | | | /-100-+ | | | | \------- orange1.1g021756m [Citrus sinensis] (100) | | \--------100--------+ | | | /------- Neem_10120_f_1 [Azadirachta indica] (82) | | \-100-+ | | \------- Neem_30941_f_1 [Azadirachta indica] (85) | | | | /------------- Gh_Sca069014G01 [Gossypium hirsutum] (5) | | | | | | /------- Gorai.007G378300.1 [Gossypium raimondii] (10) | | |--58-+ | | /-----100----+ \------- Gh_D11G3323 [Gossypium hirsutum] (57) | | | | | | | | /------- Cotton_A_05573_BGI-A2_v1.0 [Gossypium arboreum] (34) | | | \--95-+ | /--99--+ | \------- Gh_A11G2937 [Gossypium hirsutum] (76) | | | | | | | /--67--+ /------- Gh_D01G2210 [Gossypium hirsutum] (6) | | | | | /--83-+ | | | | | | \------- Gorai.002G261600.1 [Gossypium raimondii] (65) | | | | | /--100-+ | | | | | | | /------- Gh_A01G1949 [Gossypium hirsutum] (88) | | | | | | \--51-+ | | | | \--74-+ \------- Cotton_A_00334_BGI-A2_v1.0 [Gossypium arboreum] (95) | | | /--61--+ | | | | | | \-------------------- Thecc1EG021750t1 [Theobroma cacao] (42) | | | | | | | | | | /------- Cotton_A_39278_BGI-A2_v1.0 [Gossypium arboreum] (63) | | | | | /-100-+ \--89-+ | | | | \------- Gh_A04G0758 [Gossypium hirsutum] (84) | | | \--------100--------+ | \--97-+ | /------- Gh_D04G1244 [Gossypium hirsutum] (67) | | \--98-+ | | \------- Gorai.012G112000.1 [Gossypium raimondii] (99) | | | | /------- Gorai.006G180900.1 [Gossypium raimondii] (40) | | /--91-+ | | | \------- Gh_D09G1543 [Gossypium hirsutum] (58) | \------------100-----------+ | | /------- Gh_A09G1525 [Gossypium hirsutum] (61) | \-100-+ | \------- Cotton_A_02483_BGI-A2_v1.0 [Gossypium arboreum] (86) | \----------------------------------------------------- XP_010543227.1 [Tarenaya hassleriana] (21) |