PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP2307
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Subtree rooted at node 162: /----- Zmw_sc00486.1.g00020.1 [Zoysia matrella] (2) /-100+ | \----- Zjn_sc00065.1.g01000.1.am.mk [Zoysia japonica] (75) /-100+ | | /----- Zmw_sc00251.1.g00020.1 [Zoysia matrella] (10) | \-100+ /--63-+ \----- Zpz_sc00219.1.g00100.1.am.mk [Zoysia pacifica] (46) | | | \--------------- Oropetium_20150105_08340A [Oropetium thomaeum] (50) /-58-+ | | /----- 462913612 [Eragrostis tef] (78) | \------100------+ | \----- 462925440 [Eragrostis tef] (87) /-100+ | | /----- Zjn_sc00019.1.g03410.1.sm.mkhc [Zoysia japonica] (3) | | /-100+ | | | \----- Zmw_sc02732.1.g00030.1 [Zoysia matrella] (60) | \------100------+ | | /----- Zmw_sc00011.1.g00850.1 [Zoysia matrella] (55) | \-94-+ | \----- Zpz_sc01711.1.g00070.1.sm.mk [Zoysia pacifica] (68) /----99---+ | | /----- Sobic.001G154500.1.p [Sorghum bicolor] (8) | | /-95-+ | | | \----- GRMZM5G829103_P03 [Zea mays] (48) | | /----100---+ | | | \---------- GRMZM2G165488_P01 [Zea mays] (84) | | | | | | /----- Pavir.9KG069000.1.p [Panicum virgatum] (16) | \----99---+ /-100+ | | | \----- Pavir.9NG184100.1.p [Panicum virgatum] (35) | | /-100+ | | | \---------- Pahal.I02411.1 [Panicum hallii] (67) | \--99-+ | | /----- Seita.9G155700.1.p [Setaria italica] (56) | \---100---+ | \----- Sevir.9G154600.1.p [Setaria viridis] (58) | | /---------- Traes_5BL_B5F4BA2FD.2 [Triticum aestivum] (6) | | | /-99-+ /----- EMT11010 [Aegilops tauschii] (36) | | \-100+ | | \----- Traes_5DL_7F3ABFDD6.1 [Triticum aestivum] (65) | /-100-+ | | | /----- Traes_5AL_047ABC9FC.1 [Triticum aestivum] (73) /----99----+ | \---100---+ | | /-100+ \----- TRIUR3_27732-P1 [Triticum urartu] (79) | | | | | | | | /----- Bradi1g13680.1.p [Brachypodium distachyon] (14) | |------99------+ \------100------+ | | | \----- Brast02G246400.1.p [Brachypodium stacei] (77) | | | | | \-------------------------- PH01001453G0250 [Phyllostachys heterocycla] (21) | | | | /--------------------- OBART03G27560.1 [Oryza barthii] (13) | | | | | | /----- ONIVA03G28530.1 [Oryza nivara] (18) | | | /-91-+ | | | | \----- BGIOSGA010142-PA [Oryza sativa indica] (89) | | /-78-+ /-70-+ | | | | | \---------- ORUFI03G28690.1 [Oryza rufipogon] (54) | | | |--55-+ | | | | \--------------- LOC_Os03g44540.1 [Oryza sativa japonica] (24) | | /-100+ | | | | | \--------------------- OGLUM03G28230.1 [Oryza glumaepatula] (47) | | | | | | /-100+ \-------------------------- OMERI03G24480.1 [Oryza meridionalis] (71) | | | | | \-100+ \------------------------------- OPUNC03G25190.1 [Oryza punctata] (44) | | | \------------------------------------ OB03G35340.1 [Oryza brachyantha] (52) | | /--------------- Traes_5BS_F1DE20B4B.1 [Triticum aestivum] (4) | | | | /----- TRIUR3_28596-P1 [Triticum urartu] (15) | | /-99-+ | | | \----- Traes_5AS_378F353CF.2 [Triticum aestivum] (76) | /-100-+-93-+ | | | | /----- Traes_5DS_443F1993A.2 [Triticum aestivum] (39) | | | \-99-+ | | | \----- EMT29022 [Aegilops tauschii] (86) | /-100+ | /-97-+ | | \--------------- MLOC_76757.2 [Hordeum vulgare] (22) | | | | | | | | /----- Brast10G012500.1.p [Brachypodium stacei] (20) | | /-64-+ \------100------+ | | | | \----- Bradi4g01380.3.p [Brachypodium distachyon] (69) | | | | | | /-51-+ \-------------------------- PH01000162G0420 [Phyllostachys heterocycla] (62) | | | | | | | \------------------------------- PH01003045G0040 [Phyllostachys heterocycla] (83) | | | | | | /----- ORGLA12G0163500.1 [Oryza glaberrima] (12) | | | | | | | |----- OGLUM12G20730.1 [Oryza glumaepatula] (59) | | | /-99-+ | | | | |----- OBART12G19060.1 [Oryza barthii] (63) | | | | | | | | | \----- ONIVA12G18060.1 [Oryza nivara] (90) | | /----97---+ /-100+ | | | | | | /----- BGIOSGA035818-PA [Oryza sativa indica] (34) | | | | | | | | | | | | \-100+----- ORUFI12G21270.1 [Oryza rufipogon] (42) | | | | /-100-+ | | | | | | | \----- LOC_Os12g42400.1 [Oryza sativa japonica] (85) | | | | | | | | | | /-100+ \--------------- KN540135.1_FGP001 [Oryza longistaminata] (88) | | | | | | | | | | /-100+ \--------------------- OPUNC12G17240.1 [Oryza punctata] (72) | | | | | | | | | \-100+ \-------------------------- OB12G25960.1 [Oryza brachyantha] (41) | | | | | | | \------------------------------- LPERR12G16030.1 [Leersia perrieri] (32) | | | | | | /----- Pavir.3KG551100.1.p [Panicum virgatum] (5) | | | /-100+ | | | | \----- Pavir.3KG549800.1.p [Panicum virgatum] (80) | | | /-99-+ | \--86-+ | \---------- Pavir.3NG276300.1.p [Panicum virgatum] (17) /-81-+ | /--99-+ | | | | \--------------- Pahal.C04788.1 [Panicum hallii] (38) | | | /-88-+ | | | | | /----- Seita.3G390000.1.p [Setaria italica] (28) | | | | \------100------+ | | | /-62-+ \----- Sevir.3G407100.1.p [Setaria viridis] (57) | | | | | | | | /-81-+ \-------------------------- Do004812.1 [Dichanthelium oligosanthes] (61) | | | | | | | | | \------------------------------- Seita.3G390100.1.p [Setaria italica] (40) | | | /-84-+ | | | | | /----- Sobic.008G174650.1.p [Sorghum bicolor] (23) | | | | \--------------99--------------+ | | | | \----- GRMZM5G853836_P02 [Zea mays] (53) | | | | | | | | /----- 462924681 [Eragrostis tef] (9) | | | | /-----------100-----------+ | | \-84-+ | \----- 462883332 [Eragrostis tef] (45) | | | | | | | | /----- Zmw_sc00800.1.g00180.1 [Zoysia matrella] (25) --50-+ | | | /----97---+ | | | | | \----- Zjn_sc00105.1.g00840.1.sm.mkhc [Zoysia japonica] (27) | | | | | | | | | /-100-+ /----- Zmw_sc00574.1.g00090.1 [Zoysia matrella] (26) | | \---100---+ | | /-97-+ | | | | | | \----- Zpz_sc01761.1.g00150.1.sm.mkhc [Zoysia pacifica] (64) | | | | \-100+ | | | | \---------- Zpz_sc03143.1.g00070.1.sm.mkhc [Zoysia pacifica] (51) | | | /-100+ | | | | | /----- Zmw_sc00836.1.g00150.1 [Zoysia matrella] (30) | | | | | /-100+ | | | | | | \----- Zpz_sc00284.1.g00200.1.am.mkhc [Zoysia pacifica] (33) | | \-64-+ \----100---+ | | | \---------- Zjn_sc02689.1.g00010.1.sm.mkhc [Zoysia japonica] (37) | | | | | \-------------------------- Oropetium_20150105_18273A [Oropetium thomaeum] (29) | | | \--------------------------------------------------------- Spipo24G0032100 [Spirodela polyrhiza] (81) | \-------------------------------------------------------------- Aco008746.1 [Ananas comosus] (49) Root part of tree: /------------------------------------------------------------------- XP_010907709.1 [Elaeis guineensis] (1) | | /----------------- (162) | /-------63------+ | | \----------------- GSMUA_Achr7P07860_001 [Musa acuminata] (7) | /-------62-------+ | | \--------------------------------- Aco005128.1 [Ananas comosus] (66) | | | | /----------------- PEQU_32002 [Phalaenopsis equestris] (11) | |---------------100--------------+ +-------57-------+ \----------------- PEQU_40031 [Phalaenopsis equestris] (43) | | | | /----------------- GSMUA_Achr5P02590_001 [Musa acuminata] (19) | | /------100------+ | | | \----------------- GSMUA_Achr4P31420_001 [Musa acuminata] (31) | \-------100------+ | \--------------------------------- GSMUA_Achr4P28390_001 [Musa acuminata] (82) | | /----------------- PDK_30s964801g001 [Phoenix dactylifera] (70) \------------------------57-----------------------+ \----------------- XP_010906030.1 [Elaeis guineensis] (74) |