PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM3885
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Subtree rooted at node 107: /----- RrC2073_p1 [Raphanus raphanistrum] (2) /---100---+ | \----- Rsa1.0_02096.1_g00001.1 [Raphanus sativus] (6) | /-100-+ /----- XP_009129818.1 [Brassica rapa] (9) | | /-100+ | | | \----- GSBRNA2T00055384001 [Brassica napus] (14) | \-100+ /-97-+ | /----- GSBRNA2T00120564001 [Brassica napus] (13) | | \-100+ | | \----- XP_013618223.1 [Brassica oleracea] (45) | | | \--------------------- Tp2g20100 [Thellungiella parvula] (22) | | /----- RrC10913_p1 [Raphanus raphanistrum] (3) /-99-+ /---100---+ | | | \----- Rsa1.0_00362.1_g00018.1 [Raphanus sativus] (34) | | | | | /-100-+ /----- GSBRNA2T00144292001 [Brassica napus] (10) | | | | /-100+ | | | | | \----- XP_009151258.1 [Brassica rapa] (39) | | | \-100+ | \-99-+ | /----- XP_013593833.1 [Brassica oleracea] (12) | | \-100+ | | \----- GSBRNA2T00091521001 [Brassica napus] (25) | | | \--------------------- 676781942 [Sisymbrium irio] (27) /-99-+ | | /----- Cagra.5055s0003.1.p [Capsella grandiflora] (5) | | /-100+ | | | \----- Carubv10001454m [Capsella rubella] (49) | | /-91-+ | | | | /----- Csa13g038100.1 [Camelina sativa] (53) | | | \-100+ | | /--71-+ \----- Csa08g030020.1 [Camelina sativa] (56) | | | | /-100+ | | \--------------- Bostr.11214s0004.1.p [Boechera stricta] (21) | | | | | | \---100---+ /----- Araha.7771s0003.1.p [Arabidopsis halleri] (19) | | |-------99------+ | | | \----- 489657 [Arabidopsis lyrata] (30) /-100+ | | | | | \--------------------- AT5G28650.1 [Arabidopsis thaliana] (50) | | | | | \------------------------------------ Thhalv10004506m [Eutrema salsugineum] (42) | | | \----------------------------------------- AA40G00035 [Aethionema arabicum] (28) | | /----- Ciclev10028715m [Citrus clementina] (11) | /------100------+ /-100-+ | \----- orange1.1g018255m [Citrus sinensis] (17) | | | | | | /----- Cotton_A_30559_BGI-A2_v1.0 [Gossypium arboreum] (36) | | /-100+ /---100---+ | | | | | \----- Gh_D11G2566 [Gossypium hirsutum] (47) | | | | | | | | \-100-+ /----- Gh_D08G2279 [Gossypium hirsutum] (37) | | | | /-100+ /-100+ | | | | \----- Gorai.004G247000.1 [Gossypium raimondii] (48) | | \--------100--------+ \-100+ | | | | /----- Cotton_A_31763_BGI-A2_v1.0 [Gossypium arboreum] (43) | | | \-100+ | | | \----- Gh_A08G1914 [Gossypium hirsutum] (54) | | | | | \-------------------------- XP_010550912.1 [Tarenaya hassleriana] (26) | | | \---------------------------------------------------- AA10G00152 [Aethionema arabicum] (58) | | /----- XP_013628379.1 [Brassica oleracea] (7) | /-100+ | | \----- GSBRNA2T00071545001 [Brassica napus] (32) | /-100+ | | | /----- XP_009134777.1 [Brassica rapa] (29) | | \-100+ | /-100-+ \----- GSBRNA2T00111937001 [Brassica napus] (44) | | | | | | /----- Rsa1.0_00055.1_g00016.1 [Raphanus sativus] (18) /-97-+ | \---100---+ | | | \----- RrC15492_p2 [Raphanus raphanistrum] (24) | | | | | /-100+ /----- XP_013613994.1 [Brassica oleracea] (16) | | | | /-100+ | | | | | \----- GSBRNA2T00073865001 [Brassica napus] (33) | | | | /-100+ | | | | | | /----- XP_009124187.1 [Brassica rapa] (52) | | | | | \-100+ | | /-50-+ \--97-+ \----- GSBRNA2T00097431001 [Brassica napus] (55) | | | | | | | | | | /----- RrC181_p8 [Raphanus raphanistrum] (20) --99-+ | | | \---100---+ | | /-100+ | \----- Rsa1.0_00087.1_g00080.1 [Raphanus sativus] (41) | | | | | | | | | \-------------------------- 676733684 [Sisymbrium irio] (57) | | /-95-+ | | | | | \------------------------------- Tp3g03520 [Thellungiella parvula] (46) | | | | | \-------95------+ \------------------------------------ Thhalv10021115m [Eutrema salsugineum] (51) | | | \----------------------------------------- KFK37880.1 [Arabis alpina] (38) | \-------------------------------------------------------------- Bostr.2570s0232.1.p [Boechera stricta] (40) Root part of tree: /------------------------------------------------------------------- Cagra.4031s0005.1.p [Capsella grandiflora] (1) | |------------------------------------------------------------------- Carubv10015434m [Capsella rubella] (35) | | /--------------------------------- (107) | | + /-------100------+ /----------------- AT3G04670.1 [Arabidopsis thaliana] (23) | | | | | | \------100------+----------------- Araha.4820s0005.1.p [Arabidopsis halleri] (31) | | | | | \----------------- 477731 [Arabidopsis lyrata] (59) \-------100------+ | /----------------- Csa01g005410.1 [Camelina sativa] (4) | /------100------+ | | \----------------- Csa15g005640.1 [Camelina sativa] (15) \-------100------+ \--------------------------------- Csa19g006840.1 [Camelina sativa] (8) |