PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1926
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 106: /----- Gh_A09G1285 [Gossypium hirsutum] (2) /-100+ | \----- Cotton_A_13440_BGI-A2_v1.0 [Gossypium arboreum] (6) /-100+ | | /----- Gorai.006G157300.2 [Gossypium raimondii] (20) | \-100+ | \----- Gh_D09G1332 [Gossypium hirsutum] (23) /-100-+ | | /----- Gorai.009G406500.1 [Gossypium raimondii] (21) | | /-100+ | | | \----- Gh_D04G1000 [Gossypium hirsutum] (25) /-90-+ \-93-+ | | \---------- Thecc1EG022490t2 [Theobroma cacao] (58) | | /-89-+ \--------------------- evm.model.supercontig_5.63 [Carica papaya] (4) | | | \-------------------------- Ciclev10011856m [Citrus clementina] (12) /-----------100-----------+ | | /----- EcC038329.10 [Eucalyptus camaldulensis] (11) | \-----------100-----------+ | \----- Eucgr.A01534.1.p [Eucalyptus grandis] (67) | | /----- GSBRNA2T00141814001 [Brassica napus] (9) | /-100+ | | \----- XP_009133081.1 [Brassica rapa] (41) | /-100+ | | | /----- XP_013626025.1 [Brassica oleracea] (27) | | \-100+ | /---------100--------+ \----- GSBRNA2T00132470001 [Brassica napus] (66) | | | | | | /----- Rsa1.0_01481.1_g00006.1 [Raphanus sativus] (63) | | \---100---+ | | \----- RrC1990_p3 [Raphanus raphanistrum] (64) | | | | /----- GSBRNA2T00077207001 [Brassica napus] (13) | | /-100+ | | | \----- XP_013636924.1 [Brassica oleracea] (52) | | /----100---+ | | | \---------- Rsa1.0_00498.1_g00012.1 [Raphanus sativus] (33) | | | | /-71-+ | /----- RrC226_p4 [Raphanus raphanistrum] (28) | | | /-71-+ /---100---+ | | | | | | \----- Rsa1.0_00333.1_g00006.1 [Raphanus sativus] (43) | | | | | | /-100+ | | | \-100-+ /----- XP_013636224.1 [Brassica oleracea] (38) | | | | | | /-100+ | | | | | | | \----- GSBRNA2T00141134001 [Brassica napus] (47) | | | | /-65-+ \-97-+ | | | | | | | /----- GSBRNA2T00117068001 [Brassica napus] (48) | | | | | | \-100+ | | | | | | \----- XP_009143588.1 [Brassica rapa] (59) | | | \-68-+ | | | | | \-------------------------- 676787962 [Sisymbrium irio] (35) | | | | | | | | /----- Thhalv10016778m [Eutrema salsugineum] (46) | | /-100+ \------------66-----------+ | | | | \----- Tp4g18690 [Thellungiella parvula] (61) | | | | | | | | /----- 482616 [Arabidopsis lyrata] (16) | | | | /-99-+ | | | | | \----- Araha.9536s0003.1.p [Arabidopsis halleri] (50) | | | | /----100---+ --97-+ | | | | \---------- AT2G36400.1 [Arabidopsis thaliana] (37) | | | | | | | | | | /----- Carubv10025172m [Capsella rubella] (22) | | /-100-+ | /-100+ /-100+ | | | | | | | | \----- Cagra.0228s0030.1.p [Capsella grandiflora] (53) | | | | | | | /-88-+ | | | | | | | | \---------- Csa06g039040.1 [Camelina sativa] (45) | | | | \------88------+ \--88-+ | | | | | \--------------- Bostr.23794s0452.1.p [Boechera stricta] (60) | \-91-+ | | | | | \-------------------------- KFK36342.1 [Arabis alpina] (51) | | | | | \---------------------------------------------- AA60G00152 [Aethionema arabicum] (39) | | | | /----- XP_010553336.1 [Tarenaya hassleriana] (32) | \----------------------100---------------------+ | \----- XP_010527780.1 [Tarenaya hassleriana] (62) | \-------------------------------------------------------------- KFK34537.1 [Arabis alpina] (65) Root part of tree: /------------------------------------------------------------------- RrC2275_p1 [Raphanus raphanistrum] (1) | |------------------------------------------------------------------- Rsa1.0_00144.1_g00006.1 [Raphanus sativus] (10) | | /------------------------------------- (106) | | | | /------- Carubv10017366m [Capsella rubella] (17) | | /------100-----+ | | | \------- Cagra.0612s0011.1.p [Capsella grandiflora] (57) | | | | /--100--+ /--100--+ /------- Csa04g038830.1 [Camelina sativa] (19) | | | | | /---61--+ | | | | | | \------- Csa06g027310.1 [Camelina sativa] (34) | | | | \--100-+ | | | | \--------------- Csa09g061160.1 [Camelina sativa] (26) | | \--100-+ | /--88--+ | /------- 323835 [Arabidopsis lyrata] (36) | | | | /---76--+ | | | | | \------- Araha.24378s0005.1.p [Arabidopsis halleri] (44) + | | \------80------+ | | | \--------------- AT3G52910.1 [Arabidopsis thaliana] (40) | | | | | \--------------------------------------------- Thhalv10010453m [Eutrema salsugineum] (14) | | | | /------------------------------ Tp5g09420 [Thellungiella parvula] (3) | | | | | | /------- XP_009148749.1 [Brassica rapa] (7) | | | /--100--+ | /--100--+----------59---------+ | \------- GSBRNA2T00126587001 [Brassica napus] (8) | | | | /--100-+ | | | | | \--------------- XP_013634855.1 [Brassica oleracea] (49) | | | \--100--+ | | | | /------- RrC8087_p3 [Raphanus raphanistrum] (31) | | | \------100-----+ | | | \------- Rsa1.0_00368.1_g00001.1 [Raphanus sativus] (55) | | | | | | /--------------- GSBRNA2T00098678001 [Brassica napus] (24) | | | | \--100-+ | | /------- XP_013590378.1 [Brassica oleracea] (29) | \-----------------100----------------+--100--+ | | \------- GSBRNA2T00071333001 [Brassica napus] (54) | | | \--------------- XP_009125239.1 [Brassica rapa] (42) | | /------- XP_009115989.1 [Brassica rapa] (5) | /------100-----+ | | \------- GSBRNA2T00129429001 [Brassica napus] (56) | | \-----------------100-----------------+ /------- GSBRNA2T00109151001 [Brassica napus] (15) | /---78--+ | | \------- XP_013600896.1 [Brassica oleracea] (18) \--51--+ \--------------- XP_013603680.1 [Brassica oleracea] (30) |