PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1917
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 132: /----- Cotton_A_05312_BGI-A2_v1.0 [Gossypium arboreum] (3) /-100+ | \----- Gh_A06G1990 [Gossypium hirsutum] (20) /----100---+ | | /----- Gh_D06G2134 [Gossypium hirsutum] (49) | \-100+ | \----- Gorai.010G240700.1 [Gossypium raimondii] (50) | /-87-+ /---------- Gh_D10G0318 [Gossypium hirsutum] (15) | | | | | /-66-+ /----- Gh_A10G0312 [Gossypium hirsutum] (21) | | | \-74-+ /--------100--------+ \-100-+ \----- Cotton_A_34170_BGI-A2_v1.0 [Gossypium arboreum] (36) | | | | | \--------------- Gorai.011G036300.1 [Gossypium raimondii] (31) | | | \-------------------------- Thecc1EG029628t1 [Theobroma cacao] (37) | | /----- XP_013590172.1 [Brassica oleracea] (4) | /-99-+ | | \----- GSBRNA2T00148012001 [Brassica napus] (25) | /----100---+ | | | /----- XP_009106588.1 [Brassica rapa] (54) | | \-100+ | | \----- GSBRNA2T00146419001 [Brassica napus] (74) | | | /-100+ /----- RrC6013_p2 [Raphanus raphanistrum] (18) | | | /---100---+ | | | | \----- Rsa1.0_03168.1_g00005.1 [Raphanus sativus] (57) | | | | | | \-100-+ /----- GSBRNA2T00036557001 [Brassica napus] (23) | | | /-89-+ | | | | \----- XP_009128310.1 [Brassica rapa] (69) | | \-82-+ | | | /----- XP_013615912.1 [Brassica oleracea] (62) | | \-100+ | | \----- GSBRNA2T00084311001 [Brassica napus] (64) | | | | /----- Araha.4300s0012.1.p [Arabidopsis halleri] (7) | | /-63-+ | | | \----- 895772 [Arabidopsis lyrata] (45) | | | | | |---------- AT1G78700.1 [Arabidopsis thaliana] (16) | | | | | /-70-+ /----- RrC20339_p1 [Raphanus raphanistrum] (19) | | | |-100+ | /-100+ | | \----- Rsa1.0_02929.1_g00001.1 [Raphanus sativus] (26) | | | | | | | | | | /----- Thhalv10018888m [Eutrema salsugineum] (58) | | | | \-91-+ | | | | \----- KFK42252.1 [Arabis alpina] (67) | | | | | | | | /----- Cagra.1361s0016.1.p [Capsella grandiflora] (9) | | |----51----+ /-100+ | | | | | \----- Carubv10020674m [Capsella rubella] (73) | | | |-84-+ /--76-+ | | | | /----- Tp5g33760 [Thellungiella parvula] (44) | | /-100+ | | \-100+ | | | | | | \----- Tp_un0074_007 [Thellungiella parvula] (79) | | | | | | | | | | | | /----- Csa07g057700.1 [Camelina sativa] (24) | | | | | | | | | | | | \----66---+----- Csa09g092790.1 [Camelina sativa] (59) | | | | | | | | /-100+ | | \----- Csa16g048250.1 [Camelina sativa] (70) | | | | | | | | | | | \-------------------------- Bostr.20129s0304.1.p [Boechera stricta] (68) | | | | | | | | | \------------------------------- AA31G00737 [Aethionema arabicum] (10) | | | | | | | \------------------------------------ XP_010537716.1 [Tarenaya hassleriana] (76) | | | | | | /----- orange1.1g020567m [Citrus sinensis] (6) | | | /-100+ | | | | \----- Ciclev10021151m [Citrus clementina] (55) | | | /-------99------+ | | | | \---------- Neem_15705_f_1 [Azadirachta indica] (43) | | | | | |-100+ | /----- Gh_A01G0360 [Gossypium hirsutum] (13) | | | | /-54-+ /-61-+ | | | | \----- Cotton_A_14161_BGI-A2_v1.0 [Gossypium arboreum] (42) | | | | | /-100+ | | | | | | | /----- Gh_D01G0390 [Gossypium hirsutum] (32) | | | | | | \-64-+ | | | | /-93-+ | \----- Gorai.002G052400.1 [Gossypium raimondii] (75) | | | | | | | | | | | | | | /----- Gh_A11G2598 [Gossypium hirsutum] (30) | | | | | | | /-95-+ | | | | | | /-100-+ | \----- Cotton_A_28046_BGI-A2_v1.0 [Gossypium arboreum] (81) | | | | | | | |-100+ | | | | | | | | | /----- Gh_D11G2965 [Gossypium hirsutum] (65) | | | \----98---+ | | | \-97-+ | | | | \-85-+ | \----- Gorai.007G327000.1 [Gossypium raimondii] (71) | | | | | | /-100+ | | | | \--------------- Thecc1EG031955t1 [Theobroma cacao] (61) | | | | | | | | | | | \--------------------- evm.model.supercontig_77.48 [Carica papaya] (53) | | | | | | | | | \------------------------------- Eucgr.F03236.1.p [Eucalyptus grandis] (40) | | | | | | | \---------------------------------------------- Eucgr.D00428.1.p [Eucalyptus grandis] (46) | | | --100+ | | /---------- Neem_10058_f_4 [Azadirachta indica] (11) | | | | | | \-------------------100-------------------+ /----- orange1.1g020318m [Citrus sinensis] (34) | | \-100+ | | \----- Ciclev10015910m [Citrus clementina] (52) | | | \--------------------------------------------------------- evm.model.supercontig_3367.1 [Carica papaya] (33) | \-------------------------------------------------------------- XP_010518825.1 [Tarenaya hassleriana] (8) Root part of tree: /------------------------------------------------------------------- XP_009132289.1 [Brassica rapa] (1) | |------------------------------------------------------------------- GSBRNA2T00131390001 [Brassica napus] (35) | | /------- XP_013593572.1 [Brassica oleracea] (2) | /-100-+ | | \------- GSBRNA2T00112602001 [Brassica napus] (47) | | | /--100-+------------- XP_009136969.1 [Brassica rapa] (60) | | | | | \------------- GSBRNA2T00106620001 [Brassica napus] (78) | /------------89------------+ | | | /------- Rsa1.0_00119.1_g00020.1 [Raphanus sativus] (29) | | \-----99-----+ | | \------- RrC2280_p1 [Raphanus raphanistrum] (80) | | | | /------- (132) | | /-100-+ | | | \------- AA57G00162 [Aethionema arabicum] (63) | | /------80-----+ | | | \------------- KFK28557.1 [Arabis alpina] (5) | | | + | | /------- Carubv10005431m [Capsella rubella] (12) | | | /-100-+ | | | | \------- Cagra.4306s0003.1.p [Capsella grandiflora] (14) | | /--97-+ | | | | | /--99--+ /------- Csa11g028550.1 [Camelina sativa] (27) | /--100-+ | | | | | | | | | | | \--95-+------- Csa12g042870.1 [Camelina sativa] (39) | | | | | | | | | | | | | \------- Csa10g025360.1 [Camelina sativa] (77) | | | | \--75--+ | | | /--86--+ |-------------------- AT4G18890.1 [Arabidopsis thaliana] (17) | | | | | | | | | | | |-------------------- Bostr.30275s0366.1.p [Boechera stricta] (22) | | | | | | | /--99-+ |--85--+ | \-------------------- 492971 [Arabidopsis lyrata] (38) | | | | | | | | | | | \--------------------------------- Thhalv10025918m [Eutrema salsugineum] (48) | | | | | | | | | \---------------------------------------- 676792708 [Sisymbrium irio] (51) | | | | | | | \----------------------------------------------- Tp7g17600 [Thellungiella parvula] (56) \--97--+ | | | /------- Rsa1.0_05436.1_g00002.1 [Raphanus sativus] (28) | \----------------------99----------------------+ | \------- RrC152_p8 [Raphanus raphanistrum] (72) | | /------- XP_013597106.1 [Brassica oleracea] (41) \-------------------------100------------------------+ \------- GSBRNA2T00107743001 [Brassica napus] (66) |