PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cotton_A_28046_BGI-A2_v1.0

Organism

Gossypium arboreum

Taxonomic ID

29729

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium

Family

BES1

Protein Properties

Length: 349aa MW: 37711.3 Da PI: 7.8487

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cotton_A_28046_BGI-A2_v1.0	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	169.4	2e-52	2	168	1	149
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl....... 76 ++++r+ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrk + Cotton_A_28046_BGI-A2_v1.0 2 TSGTRMPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKRCMLVfgnvpve 84 5899****************************************************************9887655433223 PP DUF822 77 ....eeaeaagssas...aspesslq..sslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvss 148 ++ e + + + + +l+ ++ sa+asp +sy++sp sssfps +s++ + +++ +sl+p+l++ls++ss Cotton_A_28046_BGI-A2_v1.0 85 layaDSGERILKTDQqldLVGCKPLErmDVVGGSATASPSSSYHPSPMSSSFPSTASSSYVVNSNGdgSSLIPWLKNLSSASS 167 32221111111111112233344444434567899***************99998887765588********98766 PP DUF822 149 s 149 s Cotton_A_28046_BGI-A2_v1.0 168 S 168 5 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	2.7E-55	3	163	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence Send to blast
MTSGTRMPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG 60 WTVEPDGTTY RKRCMLVFGN VPVELAYADS GERILKTDQQ LDLVGCKPLE RMDVVGGSAT 120 ASPSSSYHPS PMSSSFPSTA SSSYVVNSNG DGSSLIPWLK NLSSASSSPM SSKLPHIYIH 180 SGSISAPVTP PLSSPTARTP RTNTDWEDLT ARPGWSAQQH SFLPSSTPPS PGRQIVPDPE 240 WFAGLRIPLS GPTSPTFSLV SSNPFGFKEE VLAGGGSRMW TPGQSGTCSP AIAAGSDHTA 300 DVPMSEVISD EFAFGSNATG LVKPWEGERI HEYCGSDDLE LTLGSSRIR

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence Send to blast

MTSGTRMPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEPDGTTY RKRCMLVFGN VPVELAYADS GERILKTDQQ LDLVGCKPLE RMDVVGGSAT  120
ASPSSSYHPS PMSSSFPSTA SSSYVVNSNG DGSSLIPWLK NLSSASSSPM SSKLPHIYIH  180
SGSISAPVTP PLSSPTARTP RTNTDWEDLT ARPGWSAQQH SFLPSSTPPS PGRQIVPDPE  240
WFAGLRIPLS GPTSPTFSLV SSNPFGFKEE VLAGGGSRMW TPGQSGTCSP AIAAGSDHTA  300
DVPMSEVISD EFAFGSNATG LVKPWEGERI HEYCGSDDLE LTLGSSRIR

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	3e-20	6	74	372	440	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	3e-20	6	74	372	440	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	3e-20	6	74	372	440	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	3e-20	6	74	372	440	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017628015.1	0.0	PREDICTED: BES1/BZR1 homolog protein 4-like
Swissprot	Q9ZV88	1e-127	BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBL	A0A0D2SUL4	1e-180	A0A0D2SUL4_GOSRA; Uncharacterized protein
STRING	Gorai.007G327000.1	0.0	(Gossypium raimondii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM1917	27	81

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-112	BES1/BZR1 homolog 4