PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Neem_10058_f_4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
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Family | BES1 | ||||||||
Protein Properties | Length: 328aa MW: 35262.1 Da PI: 8.1512 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 218.1 | 2e-67 | 2 | 147 | 1 | 150 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 ++++r+ptwkErEnnkrRERrRRaiaakiyaGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e+++++g sasas +ss+q Neem_10058_f_4 2 TSGTRMPTWKERENNKRRERRRRAIAAKIYAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVERMDIIGGSASASACSSYQ 96 5899******************************************************************************************* PP DUF822 96 sslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvsssl 150 +sp++sy++sp+sssfpsp+s+ + +a+ +sl+p+l++ls++sss+ Neem_10058_f_4 97 --------QSPCASYNPSPASSSFPSPQSSHYTANANGssdaNSLIPWLKNLSSSSSSA 147 ........9******************9988776665567789*********9987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 3.0E-68 | 3 | 141 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence Send to blast |
MTSGTRMPTW KERENNKRRE RRRRAIAAKI YAGLRMYGNY KLPKHCDNNE VLKALCNEAG 60 WTVEEDGTTY RKGCKPVERM DIIGGSASAS ACSSYQQSPC ASYNPSPASS SFPSPQSSHY 120 TANANGSSDA NSLIPWLKNL SSSSSSASSK NHPHHLYIHG GSISAPVTPP LSSPTCRTPR 180 TKNDWDETTA GSAWPAQHYP FLPSSTPPSP GRQVLPDSGW LAGIQIPQSG PSSPTFSLVS 240 RNPFGFREEV LSGGPSRMWT PGQSGTCSPA IPAGVDNTAD VPMSDCIAAE FAFGSNAAGL 300 VKPWEGERIH EECVSDDLEL TLGNSKTR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 3e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 3e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 3e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 3e-24 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006449559.1 | 0.0 | BES1/BZR1 homolog protein 4 isoform X1 | ||||
Refseq | XP_006467592.1 | 0.0 | BES1/BZR1 homolog protein 4 isoform X1 | ||||
Refseq | XP_006467593.1 | 0.0 | BES1/BZR1 homolog protein 4 isoform X2 | ||||
Refseq | XP_024047538.1 | 0.0 | BES1/BZR1 homolog protein 4 isoform X1 | ||||
Refseq | XP_024047539.1 | 0.0 | BES1/BZR1 homolog protein 4 isoform X2 | ||||
Swissprot | Q9ZV88 | 1e-139 | BEH4_ARATH; BES1/BZR1 homolog protein 4 | ||||
TrEMBL | A0A067GE96 | 0.0 | A0A067GE96_CITSI; Uncharacterized protein | ||||
TrEMBL | A0A2H5N3J6 | 0.0 | A0A2H5N3J6_CITUN; Uncharacterized protein | ||||
TrEMBL | V4W957 | 0.0 | V4W957_9ROSI; Uncharacterized protein | ||||
STRING | XP_006467592.1 | 0.0 | (Citrus sinensis) | ||||
STRING | XP_006449559.1 | 0.0 | (Citrus clementina) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1917 | 27 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 1e-116 | BES1/BZR1 homolog 4 |