PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1549
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 154: /----- Rsa1.0_00123.1_g00012.1 [Raphanus sativus] (3) /---100---+ | \----- RrC3673_p2 [Raphanus raphanistrum] (44) | /------100------+ /----- XP_013606952.1 [Brassica oleracea] (40) | | /-100+ | | | \----- GSBRNA2T00106914001 [Brassica napus] (63) | \-100+ | | /----- XP_009122122.1 [Brassica rapa] (53) | \-99-+ | \----- XP_013587407.1 [Brassica oleracea] (66) | | /----- XP_009130860.1 [Brassica rapa] (27) | /-100+ | | \----- GSBRNA2T00004958001 [Brassica napus] (86) | /-100+ /-93-+ | | /----- XP_013627045.1 [Brassica oleracea] (87) | | | \-99-+ | | /-100-+ \----- GSBRNA2T00134354001 [Brassica napus] (88) | | | | | | | | /----- Rsa1.0_04387.1_g00002.1 [Raphanus sativus] (47) | | /-97-+ \---100---+ | | | | \----- RrC151_p7 [Raphanus raphanistrum] (69) | | | | | |-55-+ \--------------------- Thhalv10014387m [Eutrema salsugineum] (58) | | | | | \-------------------------- Tp6g37740 [Thellungiella parvula] (59) | | | \------------------------------- 676744648 [Sisymbrium irio] (49) | /-100+ /----- Csa13g007080.1 [Camelina sativa] (10) | | /-50-+ | | | \----- Csa20g006320.1 [Camelina sativa] (73) | | /-100+ | | | \---------- Csa08g059360.1 [Camelina sativa] (34) | | | | | /--99-+ /---------- Bostr.13129s0456.1.p [Boechera stricta] (35) | | | | | | | | \-84-+ /----- Carubv10003130m [Capsella rubella] (75) | | | \-100+ /-74-+ | /-100+ \----- Cagra.1504s0014.1.p [Capsella grandiflora] (91) | | | | | | | | | | /---------- AT5G05090.1 [Arabidopsis thaliana] (68) | | | | | | | | \----86---+ \----100---+ /----- Araha.2901s0005.1.p [Arabidopsis halleri] (70) | | | \-97-+ | | | \----- 908412 [Arabidopsis lyrata] (80) | | | | | \-------------------------- KFK26110.1 [Arabis alpina] (67) | | | \----------------------------------------- AA12G00221 [Aethionema arabicum] (28) | | /----- Csa01g011690.1 [Camelina sativa] (7) | /-99-+ | | \----- Csa15g014310.1 [Camelina sativa] (52) | /-100+ | | \---------- Csa19g014440.1 [Camelina sativa] (14) | | | | /----- Carubv10024931m [Capsella rubella] (11) | /--93-+ /-100+ | | | | \----- Cagra.0995s0002.1.p [Capsella grandiflora] (77) | | | | | | \-90-+---------- Bostr.19424s0999.1.p [Boechera stricta] (12) | | | | | | /----- Carubv10014134m [Capsella rubella] (21) |-----------90-----------+ \-84-+ | | \----- Cagra.0834s0003.1.p [Capsella grandiflora] (32) | | | | /----- 897268 [Arabidopsis lyrata] (16) | | /-50-+ | | | \----- Araha.2506s0007.1.p [Arabidopsis halleri] (33) | \----97----+ | \---------- AT3G10760.1 [Arabidopsis thaliana] (23) /-100-+ | | /----- Thhalv10021133m [Eutrema salsugineum] (13) | |-------------------98-------------------+ | | \----- Tp3g09090 [Thellungiella parvula] (60) | | | | /----- XP_013617928.1 [Brassica oleracea] (30) | | | | | /-99-+----- RrC15320_p1 [Raphanus raphanistrum] (72) | | | | | | | \----- XP_009122638.1 [Brassica rapa] (82) | | /----97----+ | | | | /----- GSBRNA2T00060239001 [Brassica napus] (79) | | | \-100+ | | | \----- Rsa1.0_00110.1_g00030.1 [Raphanus sativus] (90) | | | | | | /----- GSBRNA2T00110982001 [Brassica napus] (31) | |-----------74-----------+ /-100+ | | | | \----- XP_013583855.1 [Brassica oleracea] (46) | | | /-89-+ | | | | | /----- XP_009146808.1 [Brassica rapa] (39) | | | | \-63-+ | | \-100-+ \----- GSBRNA2T00000369001 [Brassica napus] (51) | | | | | | /----- Rsa1.0_01591.1_g00018.1 [Raphanus sativus] (65) | | \---100---+ | | \----- RrC1282_p10 [Raphanus raphanistrum] (78) | | /-96-+ | /----- XP_010558117.1 [Tarenaya hassleriana] (56) | | |-------------------94-------------------+ | | | \----- XP_010552902.1 [Tarenaya hassleriana] (71) | | | | | |---------------------------------------------- 676765018 [Sisymbrium irio] (64) | | | | | \---------------------------------------------- AA93G00265 [Aethionema arabicum] (85) | | | | /----- Gh_D11G3348 [Gossypium hirsutum] (4) | | /-100+ | | | \----- Gorai.007G351500.1 [Gossypium raimondii] (25) | | /-100+ | | | | /----- Gh_A11G2737 [Gossypium hirsutum] (17) | | | \-85-+ | | | \----- Cotton_A_14304_BGI-A2_v1.0 [Gossypium arboreum] (43) | | | | | | /----- Cotton_A_15322_BGI-A2_v1.0 [Gossypium arboreum] (6) | | /-100-+ | /-100+ | | | |----- Gorai.002G230800.1 [Gossypium raimondii] (24) | | | | | /-100+ | | | | | | |----- Gh_D01G1929 [Gossypium hirsutum] (54) | | | | | | | | | | /-97-+ \-100+ \----- Gh_A01G1680 [Gossypium hirsutum] (76) | | | | | | | | | | | \---------- Thecc1EG045790t1 [Theobroma cacao] (8) | | | | | | | \------------99-----------+ \--------------------- evm.model.supercontig_92.70 [Carica papaya] (45) | | | | | | /----- Eucgr.K01670.1.p [Eucalyptus grandis] (48) --100+ | \---------100--------+ | | \----- Eucgr.A02201.1.p [Eucalyptus grandis] (89) | | | | /----- orange1.1g020690m [Citrus sinensis] (9) | | /-100+ | | | \----- Ciclev10012203m [Citrus clementina] (74) | \----------------------100---------------------+ | \---------- Neem_672_f_3 [Azadirachta indica] (20) | |-------------------------------------------------------------- AA61G00131 [Aethionema arabicum] (19) | \-------------------------------------------------------------- XP_010554998.1 [Tarenaya hassleriana] (61) Root part of tree: /------------------------------------------------------------------- Tp4g23290 [Thellungiella parvula] (1) | | /-------- RrC11530_p1 [Raphanus raphanistrum] (2) | /-------100------+ | | \-------- Rsa1.0_00183.1_g00024.1 [Raphanus sativus] (29) | | | /---------------100---------------+ /-------- GSBRNA2T00011219001 [Brassica napus] (15) | | | /---100--+ | | | | \-------- XP_013634583.1 [Brassica oleracea] (22) | | \--100--+ | | | /-------- XP_009142716.1 [Brassica rapa] (26) | | \---100--+ | | \-------- GSBRNA2T00132825001 [Brassica napus] (83) | | | | /-------- (154) |---66--+ /---100--+ | | | \-------- AA93G00022 [Aethionema arabicum] (42) | | /---------------70---------------+ | | | \----------------- KFK42319.1 [Arabis alpina] (5) | | | + | | /------------------------------------------ Bostr.27991s0013.1.p [Boechera stricta] (18) | | | | | | | | /-------- Csa04g055390.1 [Camelina sativa] (37) | \---100--+ | /---86---+ | | | | \-------- Csa05g011700.1 [Camelina sativa] (50) | | | /---80--+ | | | | \----------------- Csa06g046850.1 [Camelina sativa] (38) | | | /---69--+ | \---99--+ | | /-------- Cagra.1642s0062.1.p [Capsella grandiflora] (55) | | | \-------100------+ | |---62---+ \-------- Carubv10024859m [Capsella rubella] (57) | | | | | \--------------------------------- Bostr.9345s0035.1.p [Boechera stricta] (84) | | | |------------------------------------------ 903400 [Arabidopsis lyrata] (41) | | | \------------------------------------------ AT2G40970.1 [Arabidopsis thaliana] (81) | | /-------- Thhalv10017945m [Eutrema salsugineum] (36) \----------------------------60----------------------------+ \-------- 676735758 [Sisymbrium irio] (62) |