PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEF4446
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Subtree rooted at node 92: /----- augustus_masked-scaffold13677-abinit-gene-0.0-mRNA-1 [Castanea mollissima] (2) /-100+ | \----- augustus_masked-scaffold24066-abinit-gene-0.0-mRNA-1 [Castanea mollissima] (36) /----100---+ | \---------- maker-scaffold06670-snap-gene-0.21-mRNA-1 [Castanea mollissima] (55) | | /---------- Cla022531 [Citrullus lanatus] (6) | | |----100---+ /----- MELO3C010905P1 [Cucumis melo] (27) | \-100+ /-------------------84-------------------+ \----- Cucsa.232520.1 [Cucumis sativus] (31) | | | | /----- HL.SW.v1.0.G021584.1 [Humulus lupulus] (33) | | /-100+ | | | \----- PK12757.1 [Cannabis sativa] (56) | | /-100+ | | | \---------- XP_010089922.1 [Morus notabilis] (43) | \--63-+ | \--------------- XP_015884746.1 [Ziziphus jujuba] (35) | | /--------------- Medtr1g021435.1 [Medicago truncatula] (3) | | | | /----- Medtr1g021410.1 [Medicago truncatula] (11) | /----100---+ /-100+ | | | | \----- Medtr1g021400.1 [Medicago truncatula] (47) | | \-88-+ | | \---------- Medtr1g021380.1 [Medicago truncatula] (48) | | | | /----- Tp57577_TGAC_v2_mRNA14133 [Trifolium pratense] (18) | | /-95-+ | /-100+ | \----- Tp57577_TGAC_v2_mRNA16269 [Trifolium pratense] (57) | | | /-100+ | | | | \---------- Tp57577_TGAC_v2_mRNA16297 [Trifolium pratense] (21) | | | /--99-+ | | | | \--------------- Tp57577_TGAC_v2_mRNA14131 [Trifolium pratense] (32) | | | | | | | | /----- Medtr1g021350.1 [Medicago truncatula] (37) | /-63-+ \-100+ /-100+ | | | | | \----- Medtr1g021330.1 [Medicago truncatula] (52) --93-+ | | | | | | | \----100---+---------- Medtr1g021440.1 [Medicago truncatula] (45) | | | | | | | \---------- Medtr1g021360.1 [Medicago truncatula] (53) | /-90-+ | | | | \------------------------------- Medtr1g021290.1 [Medicago truncatula] (23) | | | | | |------------------------------------ XP_004499103.1 [Cicer arietinum] (14) | | | | | | /----- Tp57577_TGAC_v2_mRNA16298 [Trifolium pratense] (15) | /-90-+ \--------------89--------------+ | | | \----- Tp57577_TGAC_v2_mRNA19442 [Trifolium pratense] (29) | | | | | | /---------- XP_004499104.1 [Cicer arietinum] (10) | | | | | /--90-+ \--------------100-------------+ /----- Tp57577_TGAC_v2_mRNA16283 [Trifolium pratense] (13) | | | \-100+ | | | \----- Medtr1g021500.1 [Medicago truncatula] (16) | | | | | \---------------------------------------------- Lj0g3v0112049.1 [Lotus japonicus] (58) | | | | /----- Glyma.14G079100.1.p [Glycine max] (7) | /-61-+ /-100+ | | | | \----- KHN21019.1 [Glycine soja] (50) | | | /-100+ | | | | | /----- KHN12746.1 [Glycine soja] (12) | | | | \-100+ | | | | \----- Glyma.17G246000.1.p [Glycine max] (54) | | \-----------------100----------------+ \-100+ | /---------- C.cajan_40813 [Cajanus cajan] (8) | | | | \-85-+ /----- Vradi06g15510.1 [Vigna radiata] (25) | \-100+ | \----- Phvul.001G018400.1 [Phaseolus vulgaris] (34) | | /----- Aradu.0TU0Y [Arachis duranensis] (28) \------------------------100------------------------+ \----- Araip.VT864 [Arachis ipaensis] (42) Root part of tree: /------------------------------------------------------------------- Potri.014G036900.1 [Populus trichocarpa] (1) | |------------------------------------------------------------------- SapurV1A.0525s0060.1.p [Salix purpurea] (49) | | /---------------------- (92) | | | | /------- Potri.002G129800.1 [Populus trichocarpa] (20) | /------66------+ /--100--+ | | | | \------- CCG027805.1 [Populus euphratica] (26) | | \--100-+ | | \--------------- SapurV1A.0017s0470.1.p [Salix purpurea] (41) | | | | /------- Lus10016285 [Linum usitatissimum] (4) | | /--100--+ | | | \------- Lus10032873 [Linum usitatissimum] (5) | /---86--+ /--57--+ | | | | | /------- Lus10016286 [Linum usitatissimum] (39) + | | | \--100--+ | | | /---76--+ \------- Lus10023691 [Linum usitatissimum] (40) | | | | | | | | | \---------------------- Lus10032749 [Linum usitatissimum] (38) | | | | | /--88--+ \--75--+ /------- Manes.18G025400.1.p [Manihot esculenta] (17) | | | | /---68--+ | | | | | \------- 30170.m013944 [Ricinus communis] (19) | | | \------100-----+ | | | \--------------- Jcr4S00030.110 [Jatropha curcas] (22) | | | | /--100--+ \--------------------------------------------- Lus10032871 [Linum usitatissimum] (30) | | | | | | /------- Manes.18G025700.1.p [Manihot esculenta] (9) | | | /---61--+ | | | | \------- Jcr4S00030.120 [Jatropha curcas] (51) \--100-+ \-----------------91-----------------+ | \--------------- 30170.m013945 [Ricinus communis] (46) | | /------- Potri.002G129900.1 [Populus trichocarpa] (24) \-------------------------100------------------------+ \------- CCG027806.1 [Populus euphratica] (44) |