PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEF2263
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Subtree rooted at node 144: /---------- augustus_masked-scaffold08639-abinit-gene-0.3-mRNA-1 [Castanea mollissima] (2) | /------------------------100------------------------+ /----- WALNUT_00009898-RA [Juglans regia] (24) | \-100+ | \----- WALNUT_00012455-RA [Juglans regia] (45) | | /----- SapurV1A.0126s0330.1.p [Salix purpurea] (3) | /-100+ | | \----- SapurV1A.0126s0320.1.p [Salix purpurea] (17) | /---------100--------+ | | | /----- Potri.001G356100.1 [Populus trichocarpa] (12) | | \-65-+ | | \----- CCG003109.1 [Populus euphratica] (13) | | | | /----- Manes.07G114500.1.p [Manihot esculenta] (9) | | /-100+ | /---100---+ | \----- Manes.10G031600.1.p [Manihot esculenta] (67) | | | /-100+ | | | | \---------- Manes.15G066900.1.p [Manihot esculenta] (14) | | | /-100-+ | | | | \--------------- Jcr4S00344.50 [Jatropha curcas] (75) | | | /-99-+ | | | | \--------------------- Manes.15G066800.1.p [Manihot esculenta] (81) | | \-95-+ | | | /----- 29640.m000403 [Ricinus communis] (18) | | \---------94---------+ | | \----- Jcr4S00344.40 [Jatropha curcas] (19) | | | | /---------- XP_010096105.1 [Morus notabilis] (5) | | | | | /-100+ /----- PK25211.1 [Cannabis sativa] (10) | | | \-100+ | | /------100------+ \----- HL.SW.v1.0.G042639.1 [Humulus lupulus] (31) | /-61-+ | | | | | | \--------------- XP_015899492.1 [Ziziphus jujuba] (84) | | | | | | | | /----- MDP0000542633 [Malus domestica] (7) | | | | | | | | | /---100---+----- Pbr024467.1 [Pyrus bretschneideri] (38) | | | | | | | | | | | \----- MDP0000629527 [Malus domestica] (68) | | | /-99-+ /-100-+ | | | | | | | /---------- Pbr039770.1 [Pyrus bretschneideri] (26) | | | | | | | | | | | | | | \-100+ /----- MDP0000243113 [Malus domestica] (27) | | | | | /-100+ \-100+ | | | | | | | \----- MDP0000744693 [Malus domestica] (70) | | | | | | | | | | | | | | /----- Prupe.4G222300.1.p [Prunus persica] (43) | | | | \-100+ \------100------+ | | \-64-+ | \----- XP_008226996.1 [Prunus mume] (65) | | | | | | | | /----- FANhyb_icon00003357_a.1.g00001.1 [Fragaria x ananassa] (72) | | | \---------100--------+ | | | \----- mrna03450.1-v1.0-hybrid [Fragaria vesca] (78) | | | | | | /----- WALNUT_00002054-RA [Juglans regia] (34) | | | /-100+ --80-+ | | | \----- WALNUT_00002926-RA [Juglans regia] (63) | | \------------91-----------+ | | \---------- maker-scaffold00995-augustus-gene-0.36-mRNA-1 [Castanea mollissima] (44) | | | | /---------- Phvul.006G047800.1 [Phaseolus vulgaris] (4) | | | | | /-100+ /----- Vang0318s00070.1 [Vigna angularis] (6) | | | \-100+ | | | \----- Vradi0335s00040.1 [Vigna radiata] (69) | | /--88-+ | | | | /----- Glyma.08G320700.1.p [Glycine max] (32) | /--92-+ | \----71---+ | | | /-88-+ \----- Glyma.18G091600.1.p [Glycine max] (60) | | | | | | | | | \--------------------- C.cajan_25482 [Cajanus cajan] (35) | | | /-66-+ | | | | | /---------- XP_004513889.1 [Cicer arietinum] (29) | | | | | | | | | | \------100------+ /----- Tp57577_TGAC_v2_mRNA33308 [Trifolium pratense] (39) | | | /-100+ \-57-+ | | | | | \----- Medtr3g053690.1 [Medicago truncatula] (48) | | | | | | | | | \------------------------------- Lj6g3v0841450.1 [Lotus japonicus] (77) | | | | | | | | /----- Phvul.008G271100.1 [Phaseolus vulgaris] (16) | | | | /----88---+ | | | | | \----- Vang0387s00360.1 [Vigna angularis] (62) | | | | | | | | | /--70-+ /----- Glyma.02G294100.1.p [Glycine max] (52) | | |---100---+ | | /-100+ | | | | | | | \----- KHN38250.1 [Glycine soja] (76) | /-63-+ | | /-99-+ \-93-+ | | | | | | | \---------- Glyma.14G020100.1.p [Glycine max] (58) | | | | | | | | | | | | /-99-+ \--------------------- C.cajan_05920 [Cajanus cajan] (51) | | | | | | | | | | | | | \-------------------------- Lj2g3v3209730.1 [Lotus japonicus] (59) | | | | | | | | | | \-89-+ /----- Aradu.742WM [Arachis duranensis] (20) | | | | | /-100+ | | | | | | \----- Aradu.87AIU [Arachis duranensis] (53) | | | | \---------100--------+ | | | | | /----- Aradu.3P75R [Arachis duranensis] (49) | | | | \-100+ | | | | \----- Araip.B2ESJ [Arachis ipaensis] (66) | | | | | | | | /----- Cucsa.042770.1 [Cucumis sativus] (8) | | | \-------------------100------------------+ | | | \----- MELO3C014181P1 [Cucumis melo] (41) | | | | | \---------------------------------------------------- Lus10035329 [Linum usitatissimum] (33) | | | | /----- Glyma.02G267400.1.p [Glycine max] (11) | | /-100+ | | | \----- Glyma.14G050100.1.p [Glycine max] (37) \-66-+ | | | /----- Phvul.008G214700.1 [Phaseolus vulgaris] (15) |----------------------82----------------------+-100+ | | \----- Vang01g06710.1 [Vigna angularis] (28) | | | \---------- C.cajan_05621 [Cajanus cajan] (23) | | /----- Medtr5g085130.1 [Medicago truncatula] (21) | /-100+ | | \----- Medtr5g085125.1 [Medicago truncatula] (61) | | | | /----- Medtr5g085100.1 [Medicago truncatula] (36) | /-98-+-100+ | | | \----- Medtr5g085070.1 [Medicago truncatula] (46) | | | | | \---------- Tp57577_TGAC_v2_mRNA26535 [Trifolium pratense] (55) |--------------------58-------------------+ | |--------------- XP_004491090.1 [Cicer arietinum] (22) | | | \--------------- Lj2g3v2877180.1 [Lotus japonicus] (74) | |--------------------------------------------------------- Lus10031526 [Linum usitatissimum] (80) | \--------------------------------------------------------- Aradu.QQ9LA [Arachis duranensis] (82) Root part of tree: /------------------------------------------------------------------- MDP0000839828 [Malus domestica] (1) | | /----------- Prupe.3G209100.1.p [Prunus persica] (54) |--------------------------100--------------------------+ | \----------- XP_008229812.1 [Prunus mume] (71) | | /--------------------------------------------- (144) | | | | /---------------------- Cla003267 [Citrullus lanatus] (30) + | | | /----100---+ /----100---+ /----------- MELO3C014441P1 [Cucumis melo] (40) | | | | \----99----+ | | | | \----------- Cucsa.190200.1 [Cucumis sativus] (47) | | \----100----+ | | | /---------------------- Cla013512 [Citrullus lanatus] (42) | | | | | | \----100---+ /----------- Cucsa.139820.1 [Cucumis sativus] (73) \----100---+ \----94----+ | \----------- MELO3C019725P1 [Cucumis melo] (79) | | /----------- FANhyb_rscf00000712.1.g00002.1 [Fragaria x ananassa] (25) | /---------100---------+ | | \----------- mrna01152.1-v1.0-hybrid [Fragaria vesca] (56) | | \----------99----------+ /----------- XP_015870833.1 [Ziziphus jujuba] (50) | /----100---+ | | \----------- XP_015902520.1 [Ziziphus jujuba] (64) \----99----+ | /----------- HL.SW.v1.0.G015865.1 [Humulus lupulus] (57) \----93----+ \----------- XP_010110221.1 [Morus notabilis] (83) |