PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004491090.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 210aa    MW: 23251.9 Da    PI: 7.5609
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004491090.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-202373155
             AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++y+GVr ++ +gr++AeIrd ++    ++r++lg+f++aeeAa+a++ a+++++g
  XP_004491090.1 23 PRYRGVRKRP-WGRFAAEIRDpWK----KARVWLGTFDSAEEAARAYDTAARSYRG 73
                    68********.**********883....5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.8E-132373IPR001471AP2/ERF domain
CDDcd000189.57E-312381No hitNo description
Gene3DG3DSA:3.30.730.101.1E-312481IPR001471AP2/ERF domain
SMARTSM003801.5E-352487IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-222482IPR016177DNA-binding domain
PROSITE profilePS5103223.9732481IPR001471AP2/ERF domain
PRINTSPR003676.3E-112536IPR001471AP2/ERF domain
PRINTSPR003676.3E-114763IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MAKGRTADPT AEREPMKSPA NEPRYRGVRK RPWGRFAAEI RDPWKKARVW LGTFDSAEEA  60
ARAYDTAARS YRGPKAKTNF PLPEEENNHN SNNNIPNHQI PLTPNRVGLS KLDPVQVNWP  120
TSSGMSSTVE SFSGPRVPSS STTISRVHHA PRPIVPIADC HSDCDSSSSV VDDQDFVLTS  180
SVRKPLNIDL NLPPPNSDDE DEIRVTALCL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-2120811072Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004491090.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004491090.11e-153ethylene-responsive transcription factor 3-like
SwissprotQ9SXS86e-41ERF3_TOBAC; Ethylene-responsive transcription factor 3
TrEMBLA0A1S2XMT11e-152A0A1S2XMT1_CICAR; ethylene-responsive transcription factor 3-like
STRINGXP_004491090.11e-153(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22633484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.17e-24ethylene responsive element binding factor 3