PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_25482
Common NameKK1_025913
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 229aa    MW: 25086 Da    PI: 6.5106
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_25482genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.1e-202575155
            AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   ++y+GVr ++ +gr++AeIrdp +   ++r++lg+f+taeeAa+a++ a+++l+g
  C.cajan_25482 25 PRYRGVRKRP-WGRFAAEIRDPLK---KARVWLGTFDTAEEAARAYDTAARNLRG 75
                   68********.**********743...5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.5E-142575IPR001471AP2/ERF domain
CDDcd000182.16E-312585No hitNo description
SuperFamilySSF541715.43E-232685IPR016177DNA-binding domain
SMARTSM003802.0E-372689IPR001471AP2/ERF domain
PROSITE profilePS5103224.2632683IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-332684IPR001471AP2/ERF domain
PRINTSPR003671.9E-112738IPR001471AP2/ERF domain
PRINTSPR003671.9E-114965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MGKGGTAAAV EIGETGSRPV FFREPRYRGV RKRPWGRFAA EIRDPLKKAR VWLGTFDTAE  60
EAARAYDTAA RNLRGPKAKT NFPLSPPFYH PDPFSDHQYF AGAGEGFHDH RRPTTSGMSS  120
TVESFSGPRP VGTATVPVPA VADRRYPRTP PVVPEDCRRY PRTPPVVPED CRSDCDSSSS  180
VVDDGDGDNV ASSFRRQPLP FDLNALPLED ADVANGVCDD DLFCTVLCL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-2214104280Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways and could also regulate other AtERFs. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:11487705, ECO:0000269|PubMed:9756931}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00194DAPTransfer from AT1G50640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_25482
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by jasmonate (JA), ethylene and Alternaria brassicicola (locally and systemically). Moderate induction by wounding or drought stress does not require EIN2, whereas induction by NaCl does. Transcripts accumulate slightly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by ethylene, exogenous abscisic acid (ABA), cold and heat stress. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020230577.11e-134ethylene-responsive transcription factor 3 isoform X1
RefseqXP_020230578.11e-134ethylene-responsive transcription factor 3 isoform X2
SwissprotO803396e-49ERF82_ARATH; Ethylene-responsive transcription factor 3
TrEMBLA0A151SBG61e-164A0A151SBG6_CAJCA; Ethylene-responsive transcription factor 3
STRINGGLYMA18G10290.11e-104(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22633484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-38ethylene responsive element binding factor 3
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]