PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Phylogenetic Tree for OGRP540
Phylogenetic tree for protein ? help Back to Top |
---|
Subtree rooted at node 116: /----- Sobic.004G309600.1.p [Sorghum bicolor] (2) /-100+ | \----- GRMZM2G479760_P01 [Zea mays] (61) /-100+ | \---------- LOC_Os02g52780.1 [Oryza sativa japonica] (58) /----100---+ | \--------------- Bradi3g57960.4.p [Brachypodium distachyon] (22) | /-99-+ /--------------------- LOC_Os06g10880.1 [Oryza sativa japonica] (27) | | | | | | /---------- GRMZM2G033413_P01 [Zea mays] (46) | \-100+ | | | /-100+ /----- GRMZM2G008166_P01 [Zea mays] (52) | | | \-99-+ | \-100-+ \----- Sobic.010G081800.1.p [Sorghum bicolor] (57) | | | \--------------- Bradi1g46060.1.p [Brachypodium distachyon] (50) | | /----- GRMZM2G002075_P01 [Zea mays] (18) | /-100+ | | \----- Sobic.002G225100.1.p [Sorghum bicolor] (28) | /----100---+ /------100-----+ | | /----- LOC_Os09g28310.1 [Oryza sativa japonica] (64) | | | \-100+ | | | \----- Bradi4g32090.1.p [Brachypodium distachyon] (66) | | | | |---100---+ /----- Bradi3g38200.1.p [Brachypodium distachyon] (26) | | | /----52---+ | | | | \----- LOC_Os08g36790.1 [Oryza sativa japonica] (47) | | | | | | \-100-+ /---------- GRMZM2G157722_P01 [Zea mays] (38) | | | | | | \-100+ /----- Sobic.008G043900.2.p [Sorghum bicolor] (65) | | \-100+ | | \----- Sobic.007G155900.2.p [Sorghum bicolor] (75) | | | \------------------------------- GSVIVT01031730001 [Vitis vinifera] (44) | | /----- GRMZM2G168079_P01 [Zea mays] (4) | /-100+ | | \----- Sobic.003G363400.1.p [Sorghum bicolor] (31) | /-97-+ /--99-+ | \---------- LOC_Os01g64000.1 [Oryza sativa japonica] (45) | | /---------100--------+ | | | \--------------- Bradi2g55550.1.p [Brachypodium distachyon] (35) | | | | | | /----- GSVIVT01036137001 [Vitis vinifera] (8) | | | /---------100--------+ | | | | \----- Potri.009G164500.1 [Populus trichocarpa] (37) | | | | | | | | /---------- AT2G36270.1 [Arabidopsis thaliana] (12) | | | | | | | /-100+ | /-70-+ /----- evm.model.supercontig_5.28 [Carica papaya] (30) | | | | | | \-100+ | | | | /-100+ | \----- Potri.006G083000.1 [Populus trichocarpa] (60) | | | | | | | | | | | | | | /----- Glyma.13G153200.1.p [Glycine max] (21) /-98-+ | | | | | /--92-+ /-100+ | | | | | | | | | | \----- Glyma.10G071700.1.p [Glycine max] (34) | | | | | | | | |-100+ | | | | \-94-+ | | | \---------- Glyma.19G194500.1.p [Glycine max] (73) | | \-95-+ | \-100+ | | | | | | \--------------- GSVIVT01033832001 [Vitis vinifera] (33) | | | | | | | | | \--------------------- Solyc09g009490.2.1 [Solanum lycopersicum] (15) | | | | /-91-+ | | \------------------------------- evm_27.model.AmTr_v1.0_scaffold00114.10 [Amborella trichopoda] (9) | | | | | | | | /----- Mapoly0072s0050.1.p [Marchantia polymorpha] (68) | | | \-----------------99----------------+ | | | \----- 67189 [Selaginella moellendorffii] (71) --100+ | | | | \---------------------------------------------------- Mapoly0069s0009.1.p [Marchantia polymorpha] (42) | | | \--------------------------------------------------------- 91900 [Selaginella moellendorffii] (11) | \-------------------------------------------------------------- kfl00015_0390 [Klebsormidium flaccidum] (54) Root part of tree: /------------------------------------------------------------------- Bradi2g53060.2.p [Brachypodium distachyon] (1) | | /----- GRMZM2G159134_P02 [Zea mays] (14) |-----------------------------100-----------------------------+ | \----- Sobic.003G332200.1.p [Sorghum bicolor] (23) | | /----- (116) | /-99-+ | | \----- MA_19634g0010 [Picea abies] (16) | /------------96-----------+ | | \---------- evm_27.model.AmTr_v1.0_scaffold00101.11 [Amborella trichopoda] (76) | | | | /----- Glyma.08G227000.1.p [Glycine max] (19) | | /-100+ | | | \----- Glyma.15G222400.1.p [Glycine max] (36) | | /-100+ | | | | /----- Glyma.04G124200.1.p [Glycine max] (41) | | | \-100+ | | | \----- Glyma.06G314400.1.p [Glycine max] (56) | | /--93-+ | /-57-+ | | /---------- Potri.010G248300.1 [Populus trichocarpa] (40) | | | | | | | | | | \-100+ /----- Potri.008G010800.1 [Populus trichocarpa] (48) | | | /----99---+ \-98-+ | | | | | \----- Potri.010G248100.1 [Populus trichocarpa] (55) | | | | | | | | | \--------------------- GSVIVT01001940001 [Vitis vinifera] (20) | | | | | | | | /----- Potri.009G018500.1 [Populus trichocarpa] (24) | | | | /-100+ | | | | | \----- Potri.001G220700.1 [Populus trichocarpa] (80) | | \-84-+ /-100+ | | | | \---------- evm.model.supercontig_34.221 [Carica papaya] (32) | | | /--74-+ | | | | | /----- Glyma.20G049200.1.p [Glycine max] (49) | /-97-+ | | \---100---+ | | | | /-70-+ \----- Glyma.13G075000.1.p [Glycine max] (78) | | | | | | + | | \-100+ \--------------------- Solyc01g008980.2.1 [Solanum lycopersicum] (77) | | | | | | | \-------------------------- GSVIVT01037434001 [Vitis vinifera] (69) | | | | | | /----- Solyc10g081350.1.1 [Solanum lycopersicum] (5) | | | /---------100--------+ | | | | \----- Solyc10g076920.1.1 [Solanum lycopersicum] (63) | | | | | | | | /----- AT2G41070.1 [Arabidopsis thaliana] (7) | | | | /---100---+ | | | | | \----- AT3G56850.1 [Arabidopsis thaliana] (59) | | | | | | | \------100-----+ /--68-+ /----- Glyma.19G122800.1.p [Glycine max] (13) | /--77-+ | | | /-100+ | | | | | | | \----- Glyma.03G003400.1.p [Glycine max] (62) | | | | | \-100+ | | | | | | /----- Glyma.05G079800.1.p [Glycine max] (39) | | | | | \-100+ | | | \-100+ \----- Glyma.19G067900.1.p [Glycine max] (70) | | | | | | | | /----- Potri.016G024000.1 [Populus trichocarpa] (43) | | | | /-100+ | | | | | \----- Potri.006G025800.1 [Populus trichocarpa] (72) | | | \----97----+ | /-100+ | \---------- evm.model.supercontig_33.182 [Carica papaya] (67) | | | | | | | | /----- GRMZM2G077124_P03 [Zea mays] (3) | | | | /-100+ | | | | | \----- Sobic.002G425600.2.p [Sorghum bicolor] (74) | | | \-----------------99----------------+ | | | | /----- Bradi1g17335.1.p [Brachypodium distachyon] (17) | | | \-100+ | /-100+ | \----- LOC_Os07g48660.1 [Oryza sativa japonica] (51) | | | | | | | \---------------------------------------------------- Bradi4g43850.3.p [Brachypodium distachyon] (29) | | | | | | /----- LOC_Os05g41070.1 [Oryza sativa japonica] (10) | | | /-100+ \-66-+ | | \----- Bradi2g21820.1.p [Brachypodium distachyon] (25) | \----------------------100---------------------+ | | /----- Sobic.009G178800.1.p [Sorghum bicolor] (53) | \-100+ | \----- GRMZM2G161009_P01 [Zea mays] (79) | \-------------------------------------------------------------- LOC_Os01g59760.1 [Oryza sativa japonica] (6) |