PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.08G227000.1.p
Common NameGLYMA_08G227000, LOC100101875
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 324aa    MW: 35705.3 Da    PI: 9.2698
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.08G227000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.42e-15253302555
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                          +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN++L+k+ +el+++
  Glyma.08G227000.1.p 253 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKR-KELEQM 302
                          79****************************************65.566665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.8E-14242301No hitNo description
SMARTSM003381.1E-11249305IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.691251296IPR004827Basic-leucine zipper domain
CDDcd147075.63E-24253307No hitNo description
PfamPF001707.1E-13253297IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-11253298No hitNo description
PROSITE patternPS000360256271IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MGTQTMGTHG GGGDSNGKQS PLQPLVRQNS MYSLTLDEVQ NQLGDLGKPL TSMNIDELLK  60
NVWTAEASQT IGMDNEGTAQ ASQASLQRQA SLSLTGALSK KTVDEVWRDI QQNKIVGEKK  120
FQDRHPTLGE MTLEDFLVKA GVVAGASSNR TNTSTIAGVD SNVAVPQFPS QAQWIQYPQA  180
QYQHPPQSLM GMYMPSQGMV QPLHMGAGAS LDVSFADNQM AMPSSLMGTM SDTQTPGRKK  240
STSEDMIEKT VERRQKRMIK NRESAARSRA RKQAYTNELE NKVSRLEEEN ERLRKRKELE  300
QMLSCAPPPE PKYQLRRIAS APF*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.126340.0cotyledon| somatic embryo
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}.
UniprotTISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}.
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.08G227000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001345671.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_028244781.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
SwissprotQ9LES39e-94AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A445JIT20.0A0A445JIT2_GLYSO; ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform A
TrEMBLI1KVX10.0I1KVX1_SOYBN; Uncharacterized protein
STRINGGLYMA08G24340.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Representative plantOGRP5401580
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.12e-73ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Liao Y, et al.
    Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis.
    Planta, 2008. 228(2): p. 225-40
    [PMID:18365246]
  2. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  3. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]