PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.19G067900.1.p
Common NameGLYMA_19G067900, Glyma19g20090.1, LOC100170741
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 322aa    MW: 34904.3 Da    PI: 10.0188
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.19G067900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.71.7e-15249296553
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                          +r++r++kNRe+A rsR+R++a+++eLe kv  Le+eN++L+ +l+e++
  Glyma.19G067900.1.p 249 RRQKRMIKNRESAARSRARRQAYTQELEIKVSRLEEENERLR-RLNEME 296
                          79*************************************999.666554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.4E-15242293No hitNo description
SMARTSM003381.1E-15245315IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.346247291IPR004827Basic-leucine zipper domain
PfamPF001708.9E-12249292IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.31E-10249295No hitNo description
PROSITE patternPS000360252267IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MGSQGGAVQE PKTTTPLARQ GSLYNLTLDE VHNQLGNLGK PLGSMNLDEL LKSVWSAEAG  60
GGGEASGWDF GVGDATNMPH GKAAASGSSL NPQGSLTLSR DLSRKTVDEV WKDMQLKKVT  120
NRDKKIQERQ ATLGEMTLED FLVKAGVVAE ALPTKGGAMS GVDSNGAFSQ HGHWLQYQQL  180
SSSTQQPNVM GGYVAGHAIQ QPFQVGVNLV LDAAYSEQPA SLMGTLSDTQ TPGRKRGASG  240
VVVEKTVERR QKRMIKNRES AARSRARRQA YTQELEIKVS RLEEENERLR RLNEMERALP  300
SVPPPEPKPK QQLRRTSSAI F*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.389940.0somatic embryo| stem
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}.
UniprotTISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}.
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.19G067900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311430.0KT031143.1 Glycine max clone HN_CCL_31 BZIP transcription factor (Glyma19g20090.1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001304640.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_028216040.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES33e-98AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A0B2QD520.0A0A0B2QD52_GLYSO; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLI1N7B00.0I1N7B0_SOYBN; BZIP transcription factor
STRINGGLYMA19G20090.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Representative plantOGRP5401580
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-65ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Liao Y, et al.
    Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis.
    Planta, 2008. 228(2): p. 225-40
    [PMID:18365246]
  2. Chai C, et al.
    Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance.
    BMC Genomics, 2015. 16: p. 596
    [PMID:26268547]
  3. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  4. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]