PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LOC_Os07g48660.1
Common NameLOC4344334, Os07g0686100, OSNPB_070686100
Organism
Oryza sativa subsp. japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 275aa    MW: 29394.1 Da    PI: 9.4298
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LOC_Os07g48660.1genomeMSUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.24.8e-15183225547
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                       +r++r++kNRe+A rsR+RK+a++ eLe+k+  Le+eN++L++
  LOC_Os07g48660.1 183 RRQKRMIKNRESAARSRARKQAYTNELENKISRLEEENQRLRE 225
                       79***************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.8E-15176225No hitNo description
SMARTSM003381.0E-14179248IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.335181225IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.5E-11183226No hitNo description
CDDcd147072.26E-22183224No hitNo description
PfamPF001703.2E-12183225IPR004827Basic-leucine zipper domain
PROSITE patternPS000360186201IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0009049anatomyinflorescence
PO:0001083developmental stageinflorescence development stage
PO:0007006developmental stageIL.00 inflorescence just visible stage
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MGVHAMSCHG GGGGGGEGAL SRQGSVYSLT LNEVESHLGE PLRSMNLDDL LRTVLPAAAA  60
AAETAGRKTV DEVWRDIQGA STGRHHATPM GEMTLEDFLS RAGVAVDGAA SAAGAHWLRG  120
HYPPPPPPTT TTLQYVGGSG AVVDGVYNRV DGHGVAGFLS QVGVAGRKRG GGVDGVVEKT  180
VERRQKRMIK NRESAARSRA RKQAYTNELE NKISRLEEEN QRLREHKAVA DFSTFPSCVD  240
FLKAFLTQKL EPVMQIVPQP EPKQQLRRTT SASF*
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO1154741640.0
Expression AtlasQ0D3H8-
Cis-element ? help Back to Top
SourceLink
PlantRegMapLOC_Os07g48660.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
RiceGEOs07g48660
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1109150.0AK110915.1 Oryza sativa Japonica Group cDNA clone:002-173-C06, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015645810.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLQ0D3H80.0Q0D3H8_ORYSJ; Os07g0686100 protein
STRINGOS07T0686100-010.0(Oryza sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44413367
Representative plantOGRP5401580
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.31e-44bZIP family protein