PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.05G079800.1.p
Common NameGLYMA_05G079800, LOC100816805
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 327aa    MW: 35714.3 Da    PI: 10.0354
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.05G079800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.61.7e-15254301553
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                          +r++r++kNRe+A rsR+R++a+++eLe kv  Le+eN++L+ +l+e++
  Glyma.05G079800.1.p 254 RRQKRMIKNRESAARSRARRQAYTQELEIKVSRLEEENERLR-RLNEME 301
                          79*************************************999.666554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.3E-15247297No hitNo description
SMARTSM003388.9E-15250320IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.346252296IPR004827Basic-leucine zipper domain
PfamPF001709.1E-12254297IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-10254300No hitNo description
PROSITE patternPS000360257272IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MGSQGGAVQE PKTTTTTTTP FVRQGPLYNL TLDEVHNQLG NLGKPLGSMN LDELLKSVWS  60
AEASGGEASG LDFGVGGGDA NMQHGEAAAF GSSLNPHVSL TLSRDLSRKT VHEVWRDMQL  120
KKVTNRDKKI QERQATLGEM TLEDFLVKAG VIAEALPTTK DRAMSGVDSN GASSQHGHWL  180
QYQQLPSSVQ QPNVMGGYVA GHAIQQPFQV GVNLVLDAAY SETPASLKGA LSDTQTLGRK  240
RGVSGIVVEK TVERRQKRMI KNRESAARSR ARRQAYTQEL EIKVSRLEEE NERLRRLNEM  300
ERALPSVPPP EPKPKHQLRR TSSAIF*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.189510.0cotyledon| hypocotyl
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}.
UniprotTISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}.
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.05G079800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311430.0KT031143.1 Glycine max clone HN_CCL_31 BZIP transcription factor (Glyma19g20090.1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003524605.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_028231957.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES32e-90AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A0B2QRN10.0A0A0B2QRN1_GLYSO; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLI1K1W30.0I1K1W3_SOYBN; Uncharacterized protein
STRINGGLYMA05G13890.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Representative plantOGRP5401580
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-64ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]