PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.20G049200.1.p
Common NameGLYMA_20G049200, LOC100807027
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 275aa    MW: 30426.1 Da    PI: 8.9476
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.20G049200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.13.8e-13204247548
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                          +r rrk+kNRe+A rsR+RK+a+  eL  kv  Le+eN +Lkke
  Glyma.20G049200.1.p 204 RRLRRKIKNRESAARSRARKQAYHNELVGKVSRLEEENVKLKKE 247
                          6889**************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.2E-12200272IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.772202247IPR004827Basic-leucine zipper domain
PfamPF001701.6E-11204248IPR004827Basic-leucine zipper domain
CDDcd147072.80E-13204241No hitNo description
SuperFamilySSF579592.91E-10204252No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-11204249No hitNo description
PROSITE patternPS000360207222IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MGIQTVGSLG NGQQSHLQPS SLSRQGSWYS LTLDEVNCQL GDMGKPLGSM NLDELLQNVW  60
TAEASKSSVV VGVESENMSS SSSSLQRQAS LTLARALSGK TVDDVWREIQ QGQKKKYGED  120
VRSQEGEMTL GETTLEDFLV QAGLFAEASI SPAVGLDAMD SLATQGFQQK TGLLSSSPSI  180
GSLSDTRLGR KRDASDAYEK TLERRLRRKI KNRESAARSR ARKQAYHNEL VGKVSRLEEE  240
NVKLKKEKEF EERLLPDPLP ERKYQLRRHN SAFF*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.505280.0cotyledon
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}.
UniprotTISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}.
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.20G049200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0939450.0BT093945.1 Soybean clone JCVI-FLGm-14I20 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001345637.10.0bZIP transcription factor 27
RefseqXP_028219482.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES37e-60AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A0B2PHM20.0A0A0B2PHM2_GLYSO; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLI1NE190.0I1NE19_SOYBN; Uncharacterized protein
STRINGGLYMA20G10600.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF124642532
Representative plantOGRP5401580
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.33e-40bZIP family protein
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]