PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.19G122800.1.p
Common NameGLYMA_19G122800, LOC100783666
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 321aa    MW: 35241.2 Da    PI: 6.9802
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.19G122800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.96.9e-16250294549
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                          +r++r++kNRe+A rsR+RK+a+++eLe kv +Le+eN++L+ ++
  Glyma.19G122800.1.p 250 RRQKRMIKNRESAARSRARKQAYTQELEIKVSQLEEENERLRRQN 294
                          79****************************************765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.6E-14244295No hitNo description
SMARTSM003387.0E-14246314IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.679248293IPR004827Basic-leucine zipper domain
PfamPF001703.5E-13250295IPR004827Basic-leucine zipper domain
CDDcd147077.42E-25250295No hitNo description
SuperFamilySSF579591.25E-11250296No hitNo description
PROSITE patternPS000360253268IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MGSQGGTTQD QEPKTGSLTR QGSLYNLTLD EVQNQLGNLG KPLGSMNLDE LLKSVWTAES  60
GTDAYMQHGG QVASAGSSLN PQGSLTLSGN LSKKTIDEVW RDMQQNKSVG KERQPTLGEM  120
TLEDFLVKAG VATEPFPNED GAMAMSGVDS QHNTSQHAHW MQYQLTSVQQ QPQQQQHQHQ  180
NQQNSVMLGF SGFMTGHAVQ QPIPIVVNTV LDAGYSEALP SSLMGALSDS QTAGRKRDAS  240
GNVVEKIVER RQKRMIKNRE SAARSRARKQ AYTQELEIKV SQLEEENERL RRQNEIERAL  300
PSAPPPDPKH QLRRTSSAPL *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.269990.0cotyledon| somatic embryo| stem
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}.
UniprotTISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}.
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Function -- GeneRIF ? help Back to Top
  1. GmFDL19 is involved in soybean abiotic stress responses. [FDL19]
    [PMID: 28640834]
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.19G122800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001348915.10.0bZIP transcription factor FDL19
SwissprotQ9LES31e-103AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLI1N8K20.0I1N8K2_SOYBN; Uncharacterized protein
STRINGGLYMA19G30230.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Representative plantOGRP5401580
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.12e-91ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Li Y, et al.
    Overexpression of GmFDL19 enhances tolerance to drought and salt stresses in soybean.
    PLoS ONE, 2017. 12(6): p. e0179554
    [PMID:28640834]
  3. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]