PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Potri.010G248100.1 | ||||||||
Common Name | POPTR_0010s25440g | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | bZIP | ||||||||
Protein Properties | Length: 322aa MW: 36147.9 Da PI: 8.4116 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49.7 | 8e-16 | 251 | 297 | 5 | 52 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN +L+k+ el Potri.010G248100.1 251 RRQKRMIKNRESAARSRARKQAYTSELENKVSRLEEENGRLRKR-REL 297 79****************************************76.444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.7E-14 | 243 | 294 | No hit | No description |
SMART | SM00338 | 8.7E-14 | 247 | 319 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.369 | 249 | 294 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.3E-13 | 251 | 295 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.44E-11 | 251 | 296 | No hit | No description |
CDD | cd14707 | 8.70E-22 | 251 | 297 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 254 | 269 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence Send to blast |
MGTQTMGSQG DGSSHHMQSQ FQPLVRQNSM YSLTLDEVQN QLGDLGKPLS SMNLDELLKN 60 VWTVEAAQTT ALEVEGTPFA NQTALQRQAS LSLTSALSKK TVDEVWKDIQ QSKHDEEMKS 120 KERQPTFGEM TLEDFLVKAG VVAEASVDKK DGGSVVLVDT NAAQQFLQQS QWVQYPPQPQ 180 YQHPQQSMMG VYMPGQPMPQ PLHMGAGSMM DVSYPENQVP VPPPLTGTLS DTQTPARKRG 240 VPNMFEKTVE RRQKRMIKNR ESAARSRARK QAYTSELENK VSRLEEENGR LRKRRELENM 300 LPCIPLPEPK YQLRRTTSAP F* |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}. | |||||
Uniprot | TISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Potri.010G248100.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC210341 | 0.0 | AC210341.1 Populus trichocarpa clone POP085-M05, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002316457.2 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9LES3 | 6e-90 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | B9HVF2 | 0.0 | B9HVF2_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0010s25440.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1320 | 34 | 105 | Representative plant | OGRP540 | 15 | 80 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 1e-80 | ABA-responsive element binding protein 3 |
Link Out ? help Back to Top | |
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Phytozome | Potri.010G248100.1 |
Entrez Gene | 7469494 |
Publications ? help Back to Top | |||
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