PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GRMZM2G008166_P01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | bZIP | ||||||||
Protein Properties | Length: 194aa MW: 21583.3 Da PI: 10.55 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 22.1 | 3.3e-07 | 116 | 167 | 7 | 57 |
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk.keleelkkeva 57 rr++kN e+A+ + K a+i eLe +v++L+ N++L+ k++e+lkk+ + GRMZM2G008166_P01 116 KRRMIKNMESATNNSLNKHAYIIELEAEVAKLKDLNDELQkKQVEMLKKQKD 167 69************************************96156888888765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0056 | 110 | 175 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.34E-5 | 114 | 158 | No hit | No description |
CDD | cd14707 | 7.17E-17 | 114 | 168 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-6 | 115 | 168 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MTLEDFLVRA GVVREDMGQQ TLVLQPLAQG LFSQGNAVAL APQTMQLGNG VLTGVVGQGL 60 GGGMTVAVPT TPVVFNVMRK LEAGDLYRPL QLTMPIGTTL RVRTSRAERK VVERMKRRMI 120 KNMESATNNS LNKHAYIIEL EAEVAKLKDL NDELQKKQVE MLKKQKDEVL ERINNQHGPK 180 AKKLCLHRTL TGPW |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | GRMZM2G008166 |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in roots, shoots, leaves, flag leaves, stems, flowers and panicles (PubMed:20576316). Widely expressed (PubMed:21546455). {ECO:0000269|PubMed:20576316, ECO:0000269|PubMed:21546455}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in abscisic acid (ABA) signaling pathway (PubMed:20576316, PubMed:19947981, PubMed:21546455, PubMed:22301130, PubMed:26300907, PubMed:27468891). Transcription factor activity is fully activated by ABA (PubMed:19947981, PubMed:26300907, PubMed:27468891). Acts as positive regulator of the expression of abiotic stress-responsive genes through an ABA-dependent signaling pathway (PubMed:20576316). Acts as positive regulator of ABA signaling and drought stress tolerance (PubMed:22301130). Plays an important role in ABA and auxin responses. Involved in ABA signaling and stress responses by directly binding to the ABA-responsive element (ABRE)-containing genes, especially WRKY family genes. Modulates response to auxin. Suppresses auxin signaling by targeting ABRE-containing genes related to auxin metabolism or signaling (PubMed:21546455). {ECO:0000269|PubMed:19947981, ECO:0000269|PubMed:20576316, ECO:0000269|PubMed:21546455, ECO:0000269|PubMed:22301130, ECO:0000269|PubMed:26300907, ECO:0000269|PubMed:27468891}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GRMZM2G008166_P01 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by abscisic acid (ABA) (PubMed:20576316, PubMed:18315698, PubMed:21546455, PubMed:22301130). Induced by auxin (PubMed:21546455, PubMed:22301130). Induced by gibberellin (PubMed:21546455). Induced by salt and drought stresses (PubMed:20576316, PubMed:21546455, PubMed:22301130). Induced by cold stress (PubMed:20576316). Induced by oxidative stress (PubMed:20576316, PubMed:22301130). {ECO:0000269|PubMed:18315698, ECO:0000269|PubMed:20576316, ECO:0000269|PubMed:21546455, ECO:0000269|PubMed:22301130}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU965197 | 0.0 | EU965197.1 Zea mays clone 284430 bZIP transcription factor family protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004964902.1 | 8e-92 | bZIP transcription factor 46 | ||||
Swissprot | Q69TW5 | 3e-58 | BZP46_ORYSJ; bZIP transcription factor 46 | ||||
TrEMBL | A0A1D6LVA4 | 5e-92 | A0A1D6LVA4_MAIZE; Putative bZIP transcription factor superfamily protein | ||||
STRING | GRMZM2G008166_P01 | 1e-140 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP706 | 38 | 147 | Representative plant | OGRP540 | 15 | 80 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34000.2 | 2e-27 | abscisic acid responsive elements-binding factor 3 |
Link Out ? help Back to Top | |
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Phytozome | GRMZM2G008166_P01 |