PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GRMZM2G479760_P01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | bZIP | ||||||||
Protein Properties | Length: 397aa MW: 42408.4 Da PI: 10.5175 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 21.8 | 4.1e-07 | 271 | 292 | 5 | 26 |
CHHHCHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKka 26 +r+rr++kNRe+A rsRqRK++ GRMZM2G479760_P01 271 RRQRRMIKNRESAARSRQRKQK 292 79******************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.2E-5 | 265 | 292 | No hit | No description |
CDD | cd14707 | 1.19E-12 | 271 | 320 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 274 | 289 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 397 aa Download sequence Send to blast |
MDFPGGSGRR PQQQEPEHLP PMTPLPLARQ GSVYSLTFDE FQSSLGGAAK DFGSMNMDEL 60 LRSIWSAEEV HSVAAASASA ADHAHAAARG PVSIQHQGSL TLPRTLSQKT VDEVWRDLTC 120 VGGGPSSGSA APAAPPPPAQ RHPTLGEITL EEFLVRAGVV REDMTAPPPV PPAPVCPAPA 180 PRPPVLFPHG NVLAPLVPPL QFGNGFVSGA VGQQRGGPVP PAVSPRPVTA SAFGKMEGDD 240 LSSLSPSPVP YIFGGGLRGR KPPAMEKVVE RRQRRMIKNR ESAARSRQRK QKNPHGTGAR 300 LNGDGVAVTS VFGLDGEDHR EGDQRRPKEA AEAHERSREA RDVTRQKTGE YTDASREAAQ 360 EARDRSRATA QEGRHRRQGE GGQGRGRGHS SATRIWR |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Zm.64928 | 0.0 | meristem| ovary |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | GRMZM2G479760 |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Highly expressed in leaves. {ECO:0000269|PubMed:18931143}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that mediates abscisic acid (ABA) signaling (PubMed:18931143, PubMed:19947981, PubMed:27424498, PubMed:27325665). Can regulate the expression of a wide spectrum of stress-related genes in response to abiotic stresses through an ABA-dependent regulation pathway. Confers ABA-dependent drought and salinity tolerance (PubMed:18931143, PubMed:27325665). Binds specifically to the ABA-responsive elements (ABRE) in the promoter of target genes to mediate stress-responsive ABA signaling (PubMed:27325665, PubMed:27424498). {ECO:0000269|PubMed:18931143, ECO:0000269|PubMed:19947981, ECO:0000269|PubMed:27325665, ECO:0000269|PubMed:27424498}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GRMZM2G479760_P01 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by abscisic acid (ABA) (PubMed:18315698, PubMed:18931143). Induced by drought, salt and osmotic stresses (PubMed:18931143). {ECO:0000269|PubMed:18315698, ECO:0000269|PubMed:18931143}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU968937 | 0.0 | EU968937.1 Zea mays clone 325094 bZIP transcription factor ABI5 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001150949.1 | 1e-157 | bZIP transcription factor ABI5 | ||||
Swissprot | Q6Z312 | 1e-109 | BZP23_ORYSJ; bZIP transcription factor 23 | ||||
TrEMBL | A0A1D6HL81 | 0.0 | A0A1D6HL81_MAIZE; ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
TrEMBL | A0A3L6ENY9 | 0.0 | A0A3L6ENY9_MAIZE; BZIP transcription factor 23 | ||||
STRING | GRMZM2G479760_P01 | 0.0 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP706 | 38 | 147 | Representative plant | OGRP540 | 15 | 80 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19290.1 | 6e-36 | ABRE binding factor 4 |
Link Out ? help Back to Top | |
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Phytozome | GRMZM2G479760_P01 |