PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGMP2665
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Subtree rooted at node 150: /---------- Zpz_sc00158.1.g00220.1.sm.mkhc [Zoysia pacifica] (2) | | /----- Zmw_sc00431.1.g00260.1 [Zoysia matrella] (8) /-100+-100+ | | \----- Zjn_sc00012.1.g05220.1.sm.mkhc [Zoysia japonica] (22) | | | \---------- Zmw_sc01579.1.g00270.1 [Zoysia matrella] (51) /-100-+ | | /----- Zmw_sc03277.1.g00120.1 [Zoysia matrella] (4) | | /-100+ | | | \----- Zjn_sc00025.1.g03110.1.sm.mk [Zoysia japonica] (60) | \-100+ /-100+ | /----- Zpz_sc03373.1.g00040.1.sm.mkhc [Zoysia pacifica] (40) | | \-95-+ | | \----- Zmw_sc02135.1.g00140.1 [Zoysia matrella] (73) /-100+ | | | \--------------------- Oropetium_20150105_04992A [Oropetium thomaeum] (18) | | | \-------------------------- 462887068 [Eragrostis tef] (77) | | /---------- Pahal.C02862.1 [Panicum hallii] (3) | | | /-100+ /----- Pavir.9NG435900.1.p [Panicum virgatum] (70) /---------100--------+ | \-94-+ | | | \----- Pavir.9NG432000.1.p [Panicum virgatum] (75) | | /--96-+ | | | | /----- Seita.3G228000.1.p [Setaria italica] (44) | | | \---100---+ | | /-99-+ \----- Sevir.3G233200.1.p [Setaria viridis] (49) | | | | | | | \--------------------- Do009172.1 [Dichanthelium oligosanthes] (55) | \-100+ | | /---------- Sobic.009G152100.1.p [Sorghum bicolor] (5) | | | | \------100------+ /----- GRMZM2G132868_P01 [Zea mays] (41) | \-100+ | \----- GRMZM2G129247_P03 [Zea mays] (48) | | /----- KN538837.1_FGP011 [Oryza longistaminata] (9) | /---100---+ | | \----- OMERI01G35430.2 [Oryza meridionalis] (62) | | | | /----- BGIOSGA000430-PA [Oryza sativa indica] (21) | | /-100+ | /--82-+ | \----- ONIVA01G43200.1 [Oryza nivara] (46) | | | | | | | |---------- ORUFI01G41890.1 [Oryza rufipogon] (24) | | | | | | \-100+---------- OGLUM01G42750.1 [Oryza glumaepatula] (47) | | | | /-100+ |---------- LOC_Os01g64730.1 [Oryza sativa japonica] (57) | | | | | | | | /----- OBART01G38510.2 [Oryza barthii] (59) | | | \-100+ | /-100+ | \----- ORGLA01G0323500.1 [Oryza glaberrima] (63) | | | | | | | \--------------------- OPUNC01G37310.1 [Oryza punctata] (20) | | | | | \-------------------------- LPERR01G33060.1 [Leersia perrieri] (74) | | | /----99---+ /----- MLOC_64571.1 [Hordeum vulgare] (23) | | | /-100+ /-100+ | | | \----- TRAES3BF019000220CFD_t1 [Triticum aestivum] (50) | | | | /-100+ | | | | | | /----- Bradi2g56096.1.p [Brachypodium distachyon] (37) | | | | | \-100+ | | | \-------94------+ \----- Brast01G076300.1.p [Brachypodium stacei] (45) | | | | | | | | /----- PH01000004G0870 [Phyllostachys heterocycla] (27) | | | \---100---+ | | | \----- PH01000309G1270 [Phyllostachys heterocycla] (79) | | | | | | /--------------- Zmw_sc02691.1.g00030.1 [Zoysia matrella] (11) | | | | | | | | /----- Zmw_sc02540.1.g00070.1 [Zoysia matrella] (52) | | | /--99-+ /-99-+ | | /-99-+ | | | \----- Zpz_sc01258.1.g00010.1.am.mk [Zoysia pacifica] (86) | | | | | \-99-+ | | | | /-99-+ \---------- Zpz_sc00661.1.g00010.1.am.mk [Zoysia pacifica] (83) | | | | | | | | | | | \--------------------- Zjn_sc00009.1.g05310.1.am.mk [Zoysia japonica] (29) | | | | /-99-+ | | | | | | /---------- Zpz_sc00111.1.g00110.1.sm.mkhc [Zoysia pacifica] (35) | | | | | | | | | | | | \------100------+ /----- Zmw_sc01005.1.g00370.1 [Zoysia matrella] (71) | | | | /-99-+ \-91-+ | | | | | | \----- Zjn_sc00034.1.g05840.1.sm.mkhc [Zoysia japonica] (72) | | | | | | | | | | | \------------------------------- Oropetium_20150105_12903A [Oropetium thomaeum] (69) | | | | | | | | | | /----- GRMZM5G858197_P02 [Zea mays] (13) | | | | | /-51-+ | | | \-99-+ | \----- GRMZM2G438293_P01 [Zea mays] (28) | | | | /------100------+ | | | | | \---------- Sobic.003G368300.1.p [Sorghum bicolor] (68) | | | | | | | | | | /----- Pavir.5KG658900.1.p [Panicum virgatum] (17) | | | | | /-99-+ | | | \---100---+ | \----- Pavir.J443800.1.p [Panicum virgatum] (19) | | | | /-100+ | \-100-+ | | \---------- Pahal.E00814.1 [Panicum hallii] (31) | | | /--74-+ | | | | \--------------- Do003647.1 [Dichanthelium oligosanthes] (30) | | \-100+ | | | /----- Sevir.5G399200.1.p [Setaria viridis] (66) | | \------100------+ | | \----- Seita.5G393800.1.p [Setaria italica] (85) | | | | /--------------------- GSMUA_Achr2P20490_001 [Musa acuminata] (14) | | | /-63-+ | |--------------------- GSMUA_Achr9P08900_001 [Musa acuminata] (26) | | | | | | | | /---------- XP_010911997.1 [Elaeis guineensis] (32) | | | | | | | | | /-100+ /----- XP_010927394.1 [Elaeis guineensis] (53) | | | | | \-97-+ | | | | | \----- PDK_30s1139331g005 [Phoenix dactylifera] (65) | | | /-55-+-100-+ | | | | | | /----- GSMUA_Achr3P22470_001 [Musa acuminata] (54) | | | | | \---100---+ | | | | | \----- GSMUA_Achr10P10440_001 [Musa acuminata] (64) | | | | | | | | | |--------------------- Aco024142.1 [Ananas comosus] (33) | | \---------99--------+ | | | | |--------------------- XP_010930969.1 [Elaeis guineensis] (36) | | | | | | | \--------------------- PEQU_03258 [Phalaenopsis equestris] (42) | | | | | | /----- PEQU_40609 [Phalaenopsis equestris] (38) | | \---------55---------+ | | \----- Spipo4G0111500 [Spirodela polyrhiza] (80) | | | | /----- BGIOSGA019930-PA [Oryza sativa indica] (6) | | | | | /-96-+----- ORUFI05G19090.2 [Oryza rufipogon] (15) --51-+ | | | | | /-57-+ \----- LOC_Os05g36160.1 [Oryza sativa japonica] (58) | | | | | | | \---------- ONIVA05G18780.2 [Oryza nivara] (7) | | | | | |--------------- ORGLA05G0154900.1 [Oryza glaberrima] (12) | | | | | |--------------- OMERI05G15500.1 [Oryza meridionalis] (16) | | /--98-+ | | | |--------------- OGLUM05G18920.1 [Oryza glumaepatula] (34) | | | | | | | |--------------- OPUNC05G15820.1 [Oryza punctata] (43) | | | | | | /-83-+ |--------------- OBART05G17920.2 [Oryza barthii] (76) | | | | | | | | | \--------------- KN539839.1_FGP003 [Oryza longistaminata] (78) | | /-100+ | | | | | \--------------------- LPERR05G14180.1 [Leersia perrieri] (84) | | | | | |------------54-----------+ \-------------------------- OB05G25740.1 [Oryza brachyantha] (81) | | | | | \------------------------------- PH01001201G0540 [Phyllostachys heterocycla] (10) | | | \--------------------------------------------------------- PH01000664G0320 [Phyllostachys heterocycla] (61) | \-------------------------------------------------------------- TRIUR3_19588-P1 [Triticum urartu] (25) Root part of tree: /------------------------------------------------------------------- Bradi2g24120.3.p [Brachypodium distachyon] (1) | |------------------------------------------------------------------- Brast08G111800.1.p [Brachypodium stacei] (82) + | /--------------------------------------------- (150) | | \----------92---------+ /---------------------- Traes_1DL_DA67871B9.1 [Triticum aestivum] (39) | | \----------59----------+---------------------- MLOC_53321.1 [Hordeum vulgare] (56) | \---------------------- EMT05452 [Aegilops tauschii] (67) |