PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01579.1.g00270.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bZIP
Protein Properties Length: 134aa    MW: 15196.2 Da    PI: 10.4504
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01579.1.g00270.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.43.5e-1454108457
                                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHH CS
                          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkeva 57 
                                     ++r++r++kNRe+A rsR RK+a+++eLe  v +Le+e  +L ++++e+ +k  +
  Zmw_sc01579.1.g00270.1.sm.mkhc  54 VQRQKRMIKNRESAARSRDRKQAYVAELESQVSQLEEEQAELlREQVEQNQKRLK 108
                                     58************************************98751445555554444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.6E-1445112No hitNo description
SMARTSM003381.2E-951113IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.5425398IPR004827Basic-leucine zipper domain
PfamPF001708.8E-1354113IPR004827Basic-leucine zipper domain
CDDcd147073.17E-1655102No hitNo description
SuperFamilySSF579592.56E-115699No hitNo description
PROSITE patternPS0003605873IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
MTLEDFLARD TGAARAPAVD GTVALGFADG YVMGNGGGRA RKRAPMDPTD RAVVQRQKRM  60
IKNRESAARS RDRKQAYVAE LESQVSQLEE EQAELLREQV EQNQKRLKEL LEKAVPAIRR  120
KPSQDLRRTN SMEW
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling (PubMed:20039193). Involved in the signaling pathway that induces growth inhibition in response to D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by anoxia, drought, salt stress, oxidative stress, cold and abscisic acid (ABA) (PubMed:20039193). Induced by D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004961953.11e-57G-box-binding factor 4
SwissprotQ0JHF13e-49BZP12_ORYSJ; bZIP transcription factor 12
TrEMBLA0A368QHW42e-56A0A368QHW4_SETIT; Uncharacterized protein
STRINGGRMZM2G129247_P031e-53(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26653786
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]