PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00025.1.g03110.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 229aa MW: 24006.8 Da PI: 4.5913 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35 | 3.1e-11 | 166 | 226 | 4 | 59 |
XCHHHCHHHHHHHHHHHHHHHH....HHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKk....aeieeLeekvkeLeaeNkaL.kkeleelkkevakl 59 ++r++r++kNRe+A rsR RK+ a+++eLe v +Le+e +L ++++e+ +k ++l Zjn_sc00025.1.g03110.1.sm.mk 166 VQRQKRMIKNRESAARSRDRKQvpgnAYVAELESQVSQLEEEQAELlREQVEQNQKRLQEL 226 58*******************988889**************99875256666666666655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.9E-5 | 163 | 228 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.1E-10 | 166 | 228 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 3.36E-16 | 167 | 218 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 6.1E-11 | 168 | 227 | No hit | No description |
SuperFamily | SSF57959 | 6.59E-8 | 168 | 215 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 170 | 185 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence Send to blast |
MASSRVASSQ PQAAGSSELA RFTSGSGIGS MTMDDIIRNI YGDEPPLSAV NAGEPVQPVP 60 AVAQDAAAVR RTSEEVWEEI SAAGGLSVPA PPLPPPPAAV VSVAGAGGAA SEMTLEDFLA 120 RDAGAARAPA MDGTIALGFP DGDVLGVGGG RARKRAPIDA IDRAVVQRQK RMIKNRESAA 180 RSRDRKQVPG NAYVAELESQ VSQLEEEQAE LLREQVEQNQ KRLQELRES |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling (PubMed:20039193). Involved in the signaling pathway that induces growth inhibition in response to D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by anoxia, drought, salt stress, oxidative stress, cold and abscisic acid (ABA) (PubMed:20039193). Induced by D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004961953.1 | 7e-71 | G-box-binding factor 4 | ||||
Swissprot | Q0JHF1 | 8e-44 | BZP12_ORYSJ; bZIP transcription factor 12 | ||||
TrEMBL | A0A368QHW4 | 2e-69 | A0A368QHW4_SETIT; Uncharacterized protein | ||||
STRING | GRMZM2G132868_P01 | 4e-69 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2665 | 37 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44080.1 | 4e-10 | bZIP family protein |
Publications ? help Back to Top | |||
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