PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do009172.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 263aa    MW: 27406.9 Da    PI: 9.0106
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do009172.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.11.2e-15175219551
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                 +r++r++kNRe+A rsR RK+a+++eLe  v +Le+e  +L   +e+
  Do009172.1 175 QRQKRMIKNRESAARSRDRKQAYVAELESQVTQLEEEQAELL--AEQ 219
                 89************************************9998..444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.4E-9171234IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.461173218IPR004827Basic-leucine zipper domain
PfamPF001701.7E-12174218IPR004827Basic-leucine zipper domain
CDDcd147076.32E-15175206No hitNo description
SuperFamilySSF579591.38E-11175219No hitNo description
Gene3DG3DSA:1.20.5.1701.1E-14176218No hitNo description
PROSITE patternPS000360178193IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MASSRVMASS SPPQPASAGS SSNLARFRSG SGIGSMNMDD IIRNIYGPEA VHAVGGGAAA  60
EPSPAAPAAA HRRTSEEVWK EISAAGGLSV PALPPPPPAT GAGTGARGGG GGAAEMTLED  120
FLARDSSGRA AAAVVEGSMA LGFPVPDGDS AGGVGGVRAS RKRALVDPAD RAVMQRQKRM  180
IKNRESAARS RDRKQAYVAE LESQVTQLEE EQAELLAEQL MEKAVPVIRK KPLQDLRRTN  240
SMEWVGIVRD QEVTPFRIDL LSA
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling (PubMed:20039193). Involved in the signaling pathway that induces growth inhibition in response to D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00648PBMTransfer from LOC_Os05g36160Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo009172.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by anoxia, drought, salt stress, oxidative stress, cold and abscisic acid (ABA) (PubMed:20039193). Induced by D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004961953.11e-104G-box-binding factor 4
SwissprotQ0JHF12e-52BZP12_ORYSJ; bZIP transcription factor 12
TrEMBLA0A1E5WEL50.0A0A1E5WEL5_9POAL; Uncharacterized protein
STRINGGRMZM2G132868_P011e-99(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26653786
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.11e-19G-box binding factor 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]