PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01005.1.g00370.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 262aa MW: 28323.1 Da PI: 9.5991

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01005.1.g00370.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.4	7.4e-14	181	230	4	53
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 +r++r++kNRe+A rsR+RK+a+i eLe + +Le+eN +L e ee Zmw_sc01005.1.g00370.1.sm.mkhc 181 MQRQKRMIKNRESAARSRERKQAYIVELESLATQLEEENAELLREQEERH 230 68*************************************99987766544 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.2E-7	177	240	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.438	180	228	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.0E-12	181	229	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.88E-19	182	232	No hit	No description
SuperFamily	SSF57959	1.81E-10	182	231	No hit	No description
Gene3D	G3DSA:1.20.5.170	8.7E-13	183	236	No hit	No description
PROSITE pattern	PS00036	0	185	200	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence Send to blast
MASSRVMPSS PPSHTASDLA RFAQAASKPG GGGGSGLGSM NMEELLCGIY SEMPTPEPPP 60 ASGDRPMSPA PVPAPEIGPR RTAEEVWKDI TRRGGSAGTA VPAAPPGDVA GAGAGAEMTL 120 EDFLAREGAA KEDEIRVPGP SAPVEVQVAM GFPSGPETVP ASGRGRGRKR QLMDPVDRVA 180 MQRQKRMIKN RESAARSRER KQAYIVELES LATQLEEENA ELLREQEERH QKRLKELMER 240 VTPVIVRKKP SRDLRRTNSM QW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	162	170	GRGRGRKRQ

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling (PubMed:20039193). Involved in the signaling pathway that induces growth inhibition in response to D-allose (PubMed:23397192). {ECO:0000269\|PubMed:20039193, ECO:0000269\|PubMed:23397192}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by anoxia, drought, salt stress, oxidative stress, cold and abscisic acid (ABA) (PubMed:20039193). Induced by D-allose (PubMed:23397192). {ECO:0000269\|PubMed:20039193, ECO:0000269\|PubMed:23397192}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002458823.1	1e-107	G-box-binding factor 4
Swissprot	Q0JHF1	5e-90	BZP12_ORYSJ; bZIP transcription factor 12
TrEMBL	A0A0A9RIT5	1e-112	A0A0A9RIT5_ARUDO; Uncharacterized protein
STRING	Pavir.J05659.1.p	1e-107	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2665	37	86

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]