PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02540.1.g00070.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 555aa MW: 59648.9 Da PI: 10.1629

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02540.1.g00070.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.1	5e-15	502	546	3	47
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 + +r++r++kNRe+A rsR+RK+a+i+eLe v +L+a N+ L Zmw_sc02540.1.g00070.1.am.mk 502 AMQRQKRMIKNRESAARSRERKQAYIAELESIVTQLKADNDVLLR 546 679*************************************98765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.4E-5	500	555	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.979	502	547	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.1E-13	502	546	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.69E-10	504	548	No hit	No description
CDD	cd14707	2.25E-19	504	555	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.3E-13	505	547	No hit	No description
PROSITE pattern	PS00036	0	507	522	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence Send to blast
MQPILAQNKP NDPNGPCCRD DVKSSSRSTD PENLSSMDLK TNSPIPSENE VDVPPSAPAA 60 AMPPFCCRTP KPASSQAAAA ASPFPSLPMR EDPATNRGAI SYRRRRVSIA PRRAAARARN 120 TCAGGDWGEG TRNDVPAPGG GPCSREAPWT GTGRQLMSGC GGRGEGSWED HVRHPGRSTA 180 EVWRVRGSNR PSRRLALRTV DRRCRCMDSD QWMNETLDCQ VCEVCDGRRR VRVRHVAFKV 240 DPGLDSYCSS HQTSAEKARR SPAAKSSPLA PKGKKFQRRD VQMLLAAVQP AGFPVPAVHG 300 ARQPDTRTIG CKPQGTATGQ REEDAGDLSS YLFATFSYAT PVTRKRSEEN NPAGRRGRCV 360 QRGAPNPRRS QVGNHATNLA APHSPEDSTS RVERLGSARH DSSAPPPPHD ITGRGGSAGA 420 AVPAASAPVV VAGGGAGTTT EMTLEDFLAR EGAVKEDEVG ILGPSAPVEG QVAMGFFSGL 480 ETVTGSGRGR KRQLMDPVDR AAMQRQKRMI KNRESAARSR ERKQAYIAEL ESIVTQLKAD 540 NDVLLREQVL FLSAF

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence Send to blast

MQPILAQNKP NDPNGPCCRD DVKSSSRSTD PENLSSMDLK TNSPIPSENE VDVPPSAPAA  60
AMPPFCCRTP KPASSQAAAA ASPFPSLPMR EDPATNRGAI SYRRRRVSIA PRRAAARARN  120
TCAGGDWGEG TRNDVPAPGG GPCSREAPWT GTGRQLMSGC GGRGEGSWED HVRHPGRSTA  180
EVWRVRGSNR PSRRLALRTV DRRCRCMDSD QWMNETLDCQ VCEVCDGRRR VRVRHVAFKV  240
DPGLDSYCSS HQTSAEKARR SPAAKSSPLA PKGKKFQRRD VQMLLAAVQP AGFPVPAVHG  300
ARQPDTRTIG CKPQGTATGQ REEDAGDLSS YLFATFSYAT PVTRKRSEEN NPAGRRGRCV  360
QRGAPNPRRS QVGNHATNLA APHSPEDSTS RVERLGSARH DSSAPPPPHD ITGRGGSAGA  420
AVPAASAPVV VAGGGAGTTT EMTLEDFLAR EGAVKEDEVG ILGPSAPVEG QVAMGFFSGL  480
ETVTGSGRGR KRQLMDPVDR AAMQRQKRMI KNRESAARSR ERKQAYIAEL ESIVTQLKAD  540
NDVLLREQVL FLSAF

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2665	37	86