PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GRMZM2G132868_P01 | ||||||||
Common Name | LOC100283313, ZEAMMB73_451937 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
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Family | bZIP | ||||||||
Protein Properties | Length: 257aa MW: 27038.3 Da PI: 7.5246 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.5 | 1.2e-12 | 178 | 223 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +r++r++kNRe+A rsR RK+a+++eLe v +Le+e ++L e e GRMZM2G132868_P01 178 QRQKRMIKNRESAARSRDRKQAYVAELESQVMQLEEEQTELLREQE 223 89*************************************9987755 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.5E-7 | 174 | 238 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.611 | 176 | 228 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.6E-10 | 177 | 224 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 2.47E-17 | 178 | 223 | No hit | No description |
SuperFamily | SSF57959 | 1.53E-10 | 179 | 227 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.2E-12 | 179 | 228 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 181 | 196 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MASSRVMASS SPPQHAGAGS SSDLARFKSS GVGSMNMDDI IRNIYGPEAV NAAAAESAGL 60 GPAEPSLAAP EAAARRTSEE VWKEISAAGG LPAPVLHIPP AASSGAGARG GGGAAEMTLE 120 DFLARDSCGR AAVMEGNMAL GFPDGDGDAA GSVAGGVGGV RGGGKRALLD PADRAVMQRQ 180 KRMIKNRESA ARSRDRKQAY VAELESQVMQ LEEEQTELLR EQEDRRQKRL KELTERAVPV 240 IRKKSPQDLR RTNSMEW |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Zm.31952 | 0.0 | meristem| ovary| shoot| tassel |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | |||||
Expression Atlas | GRMZM2G132868 |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling (PubMed:20039193). Involved in the signaling pathway that induces growth inhibition in response to D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00648 | PBM | Transfer from LOC_Os05g36160 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | GRMZM2G132868_P01 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by anoxia, drought, salt stress, oxidative stress, cold and abscisic acid (ABA) (PubMed:20039193). Induced by D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU964255 | 0.0 | EU964255.1 Zea mays clone 277330 G-box-binding factor 4 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001149687.1 | 0.0 | uncharacterized protein LOC100283313 | ||||
Swissprot | Q0JHF1 | 6e-56 | BZP12_ORYSJ; bZIP transcription factor 12 | ||||
TrEMBL | B6TGZ0 | 0.0 | B6TGZ0_MAIZE; G-box-binding factor 4 | ||||
STRING | GRMZM2G132868_P01 | 0.0 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2665 | 37 | 86 | Representative plant | OGRP9845 | 4 | 10 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44080.1 | 1e-15 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | GRMZM2G132868_P01 |
Entrez Gene | 100283313 |
Publications ? help Back to Top | |||
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