PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00431.1.g00260.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 389aa MW: 42354.1 Da PI: 12.0259

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00431.1.g00260.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.7	5.8e-14	310	363	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkeva 57 +r++r++kNRe+A rsR RK+a+++eLe v +Le+e +L ++++e+ +k + Zmw_sc00431.1.g00260.1.sm.mkhc 310 QRQKRMIKNRESAARSRDRKQAYVAELESQVSQLEEEQAELlREQVEQNQKRLK 363 89***********************************98752555555555554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.3E-13	300	367	No hit	No description
SMART	SM00338	2.2E-9	306	368	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.542	308	353	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.4E-12	309	366	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.0E-10	310	355	No hit	No description
CDD	cd14707	2.85E-17	310	365	No hit	No description
PROSITE pattern	PS00036	0	313	328	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence Send to blast
MQCTAPRTDT RRKKFRFLNA LLLRAGRGPR RRHRRRRPAG TLRFEKGGHG LPIITRGSRL 60 VFPSRRHAWR RAQNTELQTA LRAALLSLSS SPTNQPSRSS RSFFFTARLG DKRSEPRDFI 120 RGKGAGRRAG DFFFPLPFPR AVQAGRRMAS SRVATSPPQA TGSSSDLARF TSGGSGIGSM 180 NMDDIIRNIY GDAPPPGAAG GPVETVAAAA APEAAAVRRT SEEVWKEISA AGGLSVPAPA 240 LPPPVVAAGG GGAAEMTLED FLARDTGAAR APAVDGTVAL GFADGYVMGN GGGRARKRAP 300 MDPTDRAVVQ RQKRMIKNRE SAARSRDRKQ AYVAELESQV SQLEEEQAEL LREQVEQNQK 360 RLKELLVKTV PAIRRKPSQD LRRTNSMEW

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence Send to blast

MQCTAPRTDT RRKKFRFLNA LLLRAGRGPR RRHRRRRPAG TLRFEKGGHG LPIITRGSRL  60
VFPSRRHAWR RAQNTELQTA LRAALLSLSS SPTNQPSRSS RSFFFTARLG DKRSEPRDFI  120
RGKGAGRRAG DFFFPLPFPR AVQAGRRMAS SRVATSPPQA TGSSSDLARF TSGGSGIGSM  180
NMDDIIRNIY GDAPPPGAAG GPVETVAAAA APEAAAVRRT SEEVWKEISA AGGLSVPAPA  240
LPPPVVAAGG GGAAEMTLED FLARDTGAAR APAVDGTVAL GFADGYVMGN GGGRARKRAP  300
MDPTDRAVVQ RQKRMIKNRE SAARSRDRKQ AYVAELESQV SQLEEEQAEL LREQVEQNQK  360
RLKELLVKTV PAIRRKPSQD LRRTNSMEW

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling (PubMed:20039193). Involved in the signaling pathway that induces growth inhibition in response to D-allose (PubMed:23397192). {ECO:0000269\|PubMed:20039193, ECO:0000269\|PubMed:23397192}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00648	PBM	Transfer from LOC_Os05g36160	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by anoxia, drought, salt stress, oxidative stress, cold and abscisic acid (ABA) (PubMed:20039193). Induced by D-allose (PubMed:23397192). {ECO:0000269\|PubMed:20039193, ECO:0000269\|PubMed:23397192}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001149687.1	1e-82	uncharacterized protein LOC100283313
Swissprot	Q0JHF1	4e-55	BZP12_ORYSJ; bZIP transcription factor 12
TrEMBL	B6TGZ0	2e-81	B6TGZ0_MAIZE; G-box-binding factor 4
STRING	GRMZM2G132868_P01	4e-82	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2665	37	86

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]