PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PH01000309G1270 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family | bZIP | ||||||||
Protein Properties | Length: 194aa MW: 21287.3 Da PI: 5.5379 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49.7 | 8e-16 | 111 | 172 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevaklksev 63 + +r++r++kNRe+A rsR+RK+a+i+eLe v +Le+eN +L +++ e+++k ++lk +v PH01000309G1270 111 AMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAQLlREQEEQIQKRLKELKEKV 172 689*************************************9972566678888888888876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.0E-10 | 109 | 174 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.105 | 111 | 175 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.2E-15 | 111 | 172 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 2.05E-19 | 113 | 160 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-14 | 114 | 172 | No hit | No description |
SuperFamily | SSF57959 | 2.56E-11 | 114 | 160 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 116 | 131 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MSPSPAPEIA AAPRTVDEVW KEITGGGPSR VAPAAPAVVV ADAGTGAPEM TLEDFLARES 60 AVKEDEVRIF GPPAPAEGQV VMGFLDGAEG VGGVGGRGRK RQLMDPMDRA AMQRQKRMIK 120 NRESAARSRE RKQAYIAELE SLVTQLEEEN AQLLREQEEQ IQKRLKELKE KVTPVIIRKM 180 PSQDLRRTNS MEW* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling (PubMed:20039193). Involved in the signaling pathway that induces growth inhibition in response to D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PH01000309G1270 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by anoxia, drought, salt stress, oxidative stress, cold and abscisic acid (ABA) (PubMed:20039193). Induced by D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015612904.1 | 4e-82 | bZIP transcription factor 12-like | ||||
Swissprot | Q0JHF1 | 3e-83 | BZP12_ORYSJ; bZIP transcription factor 12 | ||||
TrEMBL | A0A0D9YHX3 | 9e-82 | A0A0D9YHX3_9ORYZ; Uncharacterized protein | ||||
TrEMBL | Q9M4Y5 | 8e-82 | Q9M4Y5_ORYSA; OSE2 | ||||
STRING | OGLUM01G42750.1 | 2e-82 | (Oryza glumipatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2665 | 37 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03970.1 | 8e-32 | G-box binding factor 4 |
Publications ? help Back to Top | |||
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