PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Phylogenetic Tree for OGEM1602
Phylogenetic tree for protein ? help Back to Top |
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Subtree rooted at node 159: /----- XP_009134239.1 [Brassica rapa] (2) /-100+ | \----- GSBRNA2T00131556001 [Brassica napus] (4) /-100+ | | /----- XP_013594517.1 [Brassica oleracea] (3) | \-100+ /--74-+ \----- GSBRNA2T00093635001 [Brassica napus] (49) | | | | /----- Rsa1.0_00108.1_g00047.1 [Raphanus sativus] (65) | \---100---+ | \----- RrC10260_p2 [Raphanus raphanistrum] (88) | /-95-+ /----- GSBRNA2T00131553001 [Brassica napus] (8) | | /-100+ | | | \----- XP_009134198.1 [Brassica rapa] (71) | | /-100+ | | | \---------- XP_013614741.1 [Brassica oleracea] (85) | \-100-+ | \--------------- Rsa1.0_00108.1_g00044.1 [Raphanus sativus] (18) /-100+ | | /----- XP_013614968.1 [Brassica oleracea] (31) | | /-100+ | | | \----- GSBRNA2T00067621001 [Brassica napus] (72) | | /-100+ | | | | /----- GSBRNA2T00131555001 [Brassica napus] (43) /-53-+ | | \-100+ | | \----100---+ \----- XP_009134220.1 [Brassica rapa] (86) | | | | | \--------------- Rsa1.0_00108.1_g00045.1 [Raphanus sativus] (34) /-94-+ | | | \------------------------------- 676713258 [Sisymbrium irio] (82) | | | | /----- GSBRNA2T00128614001 [Brassica napus] (12) /-97-+ \--------------98--------------+ | | \----- GSBRNA2T00047654001 [Brassica napus] (19) | | | \----------------------------------------- Tp7g19080 [Thellungiella parvula] (62) | | /----- Thhalv10000542m [Eutrema salsugineum] (15) | /-100+ | | \----- Thhalv10000527m [Eutrema salsugineum] (45) | /-74-+ | | | /----- Thhalv10000425m [Eutrema salsugineum] (20) | | \-98-+ | /--65-+ \----- Thhalv10000492m [Eutrema salsugineum] (38) | | | /--98-+ | | /----- Thhalv10000621m [Eutrema salsugineum] (30) | | | \----89---+ | | /-100+ \----- Thhalv10000420m [Eutrema salsugineum] (78) | | | | | | | |--------------------- Thhalv10000493m [Eutrema salsugineum] (64) | | | | | | | \--------------------- Thhalv10000624m [Eutrema salsugineum] (66) | | /-100+ | | | | /--------------- Thhalv10027456m [Eutrema salsugineum] (33) | | | | | | | | | | /----- Thhalv10002284m [Eutrema salsugineum] (35) | | | \----100---+ /-63-+ | \------100-----+ | | \----- Thhalv10027321m [Eutrema salsugineum] (36) | | \-100+ | | \---------- Thhalv10027190m [Eutrema salsugineum] (63) | | | \------------------------------- Thhalv10026815m [Eutrema salsugineum] (46) | /-97-+ /---------- XP_009123829.1 [Brassica rapa] (6) | | | | | /-100+ /----- GSBRNA2T00126816001 [Brassica napus] (22) | | | \-99-+ | | | \----- XP_009108661.1 [Brassica rapa] (24) | | /--53-+ | | | |--------------- GSBRNA2T00020468001 [Brassica napus] (23) | | | | | | /-100+ \--------------- XP_013627684.1 [Brassica oleracea] (73) | | | | | | | \--------------------- GSBRNA2T00126809001 [Brassica napus] (26) | | /-100+ | | | | /----- Rsa1.0_01263.1_g00005.1 [Raphanus sativus] (17) | | | \---------100--------+ | | | \----- RrC3937_p1 [Raphanus raphanistrum] (68) | | | | | | /----- GSBRNA2T00138127001 [Brassica napus] (28) | \---------100--------+ /-100+ | | | \----- GSBRNA2T00131559001 [Brassica napus] (51) | | /-99-+ | | | \---------- 676713264 [Sisymbrium irio] (60) | | | | \-------98------+ /---------- Tp7g19130 [Thellungiella parvula] (40) | | | | \-100+ /----- Tp7g19120 [Thellungiella parvula] (76) | \-100+ | \----- Tp7g19110 [Thellungiella parvula] (81) | | /---------- Csa12g037480.1 [Camelina sativa] (5) | | | | /----- Csa11g025430.1 [Camelina sativa] (29) | /-100+-58-+ | | | \----- Csa12g037460.1 [Camelina sativa] (37) | | | | /--53-+ \---------- Csa12g037400.1 [Camelina sativa] (67) | | | /-97-+ /-59-+ \--------------- Csa11g025410.1 [Camelina sativa] (79) | | | | | | /-100+ \--------------------- Csa10g022390.1 [Camelina sativa] (21) | | | | | | | \-------------------------- Csa12g042020.1 [Camelina sativa] (27) | | | | | | /----- Carubv10019341m [Capsella rubella] (42) | | /-100+ /-100+ | | | | | \----- Cagra.5134s0001.1.p [Capsella grandiflora] (54) | | | | /-100+ | | | | | \---------- Carubv10007153m [Capsella rubella] (61) | | | \------100------+ | | | \--------------- Cagra.1062s0030.1.p [Capsella grandiflora] (44) | | /-100+ | | | |------------------------------------ Bostr.10689s0057.1.p [Boechera stricta] (50) | | | | | | | | /----- 492780 [Arabidopsis lyrata] (59) | | | | /-100+ | | | | | \----- Araha.7999s0005.1.p [Arabidopsis halleri] (87) | | | \-----------100-----------+ | | | | /----- AT4G21040.1 [Arabidopsis thaliana] (83) | | | \-100+ | | | \----- AT4G21080.1 [Arabidopsis thaliana] (89) | | /-99-+ | | | | /----- 914578 [Arabidopsis lyrata] (11) --73-+ | | | /---100---+ | | | | | \----- AT4G21050.1 [Arabidopsis thaliana] (13) | | | | | | | | | /----98----+ /----- 914579 [Arabidopsis lyrata] (32) | | | | | | /-100+ | | | | | | | \----- Araha.12732s0027.1.p [Arabidopsis halleri] (39) | | | | | \-100+ | | | | | \---------- AT4G21030.1 [Arabidopsis thaliana] (70) | | | \------100-----+ | | | | /--------------------- Bostr.10689s0053.1.p [Boechera stricta] (16) | \----100---+ | | | | | | /----- Cagra.1062s0034.1.p [Capsella grandiflora] (25) | | \-99-+ /---100---+ | | | | \----- Carubv10006458m [Capsella rubella] (84) | | | | | | \--93-+ /---------- Csa10g022470.1 [Camelina sativa] (48) | | | | | | \-100+ /----- Csa12g037530.1 [Camelina sativa] (58) | | \-84-+ | | \----- Csa11g025480.1 [Camelina sativa] (80) | | | | /----- KFK30156.1 [Arabis alpina] (53) | \-------------------95-------------------+ | \----- AA57G00307 [Aethionema arabicum] (69) | \-------------------------------------------------------------- Thhalv10027080m [Eutrema salsugineum] (52) Root part of tree: /------------------------------------------------------------------- XP_013597335.1 [Brassica oleracea] (1) | |------------------------------------------------------------------- GSBRNA2T00156903001 [Brassica napus] (7) | | /---------- (159) | /-------------54------------+ | | \---------- Tp7g19090 [Thellungiella parvula] (9) | | | | /---------- GSBRNA2T00098203001 [Brassica napus] (10) | | /---100--+ | | | \---------- XP_013594711.1 [Brassica oleracea] (57) + | /---100---+ | | | | /---------- XP_009134257.1 [Brassica rapa] (75) | /---100---+ | \---100--+ | | |---100--+ \---------- GSBRNA2T00131557001 [Brassica napus] (77) | | | | | | | | /---------- Rsa1.0_00108.1_g00048.1 [Raphanus sativus] (41) | | | \--------100-------+ | /---100--+ | \---------- RrC10260_p1 [Raphanus raphanistrum] (47) | | | | | | | \-------------------------------------- 676713260 [Sisymbrium irio] (55) | | | \----97---+ \------------------------------------------------ RrC139_p2 [Raphanus raphanistrum] (56) | | /---------- XP_009137161.1 [Brassica rapa] (14) \----------------------70----------------------+ \---------- GSBRNA2T00023653001 [Brassica napus] (74) |